EnhancerDB
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  3. rs540364510[chr16:89570826]
Enhancers that have rs540364510[chr16:89570826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89566691 89571239 enh16908
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Colon (HCT116) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs540364510[chr16:89570826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89568234 89570992 ZBTB33 GTRD no Lung (A549) 108226836
chr16 89568860 89571041 TCF7L2 GTRD no Colon (HCT116) 21738718
chr16 89568860 89571041 TCF7L2 GTRD no Colon (HCT116) 108226858
chr16 89568923 89572296 TCF7L2 GTRD no Colon (HCT116) 21738721
chr16 89568923 89572296 TCF7L2 GTRD no Colon (HCT116) 108226867
chr16 89568923 89572296 TCF7L2 GTRD no Colon (HCT116) 108226868
chr16 89568954 89570973 ZNF143 GTRD no Epithelial (MCF-7) 21738723
chr16 89568954 89570973 ZNF143 GTRD no Epithelial (MCF-7) 108226871
chr16 89568956 89572201 TCF7L2 GTRD no Colon (HCT116) 21738724
chr16 89568956 89572201 TCF7L2 GTRD no Colon (HCT116) 108226872
chr16 89568956 89572201 TCF7L2 GTRD no Colon (HCT116) 108226873
chr16 89568984 89570961 ZNF143 GTRD no Epithelial (MCF-7) 21738726
chr16 89568984 89570961 ZNF143 GTRD no Epithelial (MCF-7) 108226876
chr16 89569022 89572354 TCF7L2 GTRD no Colon (HCT116) 21738727
chr16 89569022 89572354 TCF7L2 GTRD no Colon (HCT116) 108226878
chr16 89569022 89572354 TCF7L2 GTRD no Colon (HCT116) 108226879
chr16 89569071 89572358 TCF7L2 GTRD no Colon (HCT116) 21738729
chr16 89569071 89572358 TCF7L2 GTRD no Colon (HCT116) 108226882
chr16 89569071 89572358 TCF7L2 GTRD no Colon (HCT116) 108226883
chr16 89569085 89570985 ZNF143 GTRD no Epithelial (MCF-7) 21738730
chr16 89569085 89570985 ZNF143 GTRD no Epithelial (MCF-7) 108226884
chr16 89569109 89570978 ZNF143 GTRD no Epithelial (MCF-7) 21738731
chr16 89569109 89570978 ZNF143 GTRD no Epithelial (MCF-7) 108226885
chr16 89569121 89570966 ZNF143 GTRD no Epithelial (MCF-7) 21738732
chr16 89569121 89570966 ZNF143 GTRD no Epithelial (MCF-7) 108226886
chr16 89569974 89572352 TCF7L2 GTRD no Colon (HCT116) 21738733
chr16 89569974 89572352 TCF7L2 GTRD no Colon (HCT116) 108226887
chr16 89570538 89572181 TCF7L2 GTRD no Colon (HCT116) 21738734
chr16 89570538 89572181 TCF7L2 GTRD no Colon (HCT116) 108226888
chr16 89570666 89572100 TCF7L2 GTRD no Colon (HCT116) 21738735
chr16 89570666 89572100 TCF7L2 GTRD no Colon (HCT116) 108226889
chr16 89570819 89570840 IRF1 JASPAR yes 12350905
chr16 89570820 89570841 IRF1 JASPAR yes 12350906
chr16 89570821 89570842 IRF1 JASPAR yes 12350907
chr16 89570823 89570844 IRF1 JASPAR yes 12350908
chr16 89570824 89570845 IRF1 JASPAR yes 12350909
chr16 89570825 89570840 FOXP1 JASPAR yes 12350910
chr16 89570825 89570846 IRF1 JASPAR yes 12350911
chr16 89570826 89570841 FOXP1 JASPAR yes 12350912
Genes associated with rs540364510[chr16:89570826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More