EnhancerDB
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Enhancers that have rs540373162[chr17:66509245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 66509186 66509763 vista25704
VISTA
Transcript factors that have rs540373162[chr17:66509245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 66505908 66510759 ZNF143 GTRD no Epithelial (MCF-7) 108287608
chr17 66505954 66510423 ZNF143 GTRD no Epithelial (MCF-7) 108287609
chr17 66506006 66510036 ZNF143 GTRD no Epithelial (MCF-7) 108287610
chr17 66506029 66510675 ZNF143 GTRD no Epithelial (MCF-7) 108287611
chr17 66506056 66510593 ZBTB33 GTRD no Lung (A549) 108287612
chr17 66506212 66510789 ZBTB33 GTRD no Lung (A549) 108287613
chr17 66506243 66510880 ZBTB33 GTRD no Lung (A549) 108287614
chr17 66506295 66510764 ZBTB33 GTRD no Lung (A549) 108287615
chr17 66506334 66510843 ZBTB33 GTRD no Lung (A549) 108287616
chr17 66506356 66509867 ZNF274 GTRD no Bone Marrow (K562) 108287617
chr17 66506394 66510786 ZBTB33 GTRD no Lung (A549) 108287618
chr17 66506418 66510254 ZBTB33 GTRD no Lung (A549) 108287619
chr17 66506469 66510921 ZNF274 GTRD no Cervix (HeLa-S3) 108287620
chr17 66506599 66510159 ZBTB33 GTRD no Brain (SK-N-SH) 108287621
chr17 66506641 66510240 ZBTB33 GTRD no Lung (A549) 108287622
chr17 66506651 66510056 ZNF274 GTRD no Bone Marrow (K562) 108287623
chr17 66506658 66510462 ZBTB33 GTRD no Lung (A549) 108287624
chr17 66506812 66510213 ZNF274 GTRD no Bone Marrow (K562) 108287625
chr17 66506812 66510626 ZBTB33 GTRD no Lung (A549) 108287626
chr17 66507027 66510029 ZBTB33 GTRD no Lung (A549) 108287627
chr17 66507029 66510196 ZBTB33 GTRD no Lung (A549) 108287628
chr17 66507074 66510096 ZBTB33 GTRD no Lung (A549) 108287629
chr17 66507106 66510154 ZBTB33 GTRD no Lung (A549) 108287630
chr17 66507133 66509967 ZNF143 GTRD no Epithelial (MCF-7) 108287631
chr17 66507134 66510144 ZBTB33 GTRD no Lung (A549) 108287632
chr17 66507170 66510199 ZNF274 GTRD no Cervix (HeLa-S3) 108287633
chr17 66507333 66510615 ZBTB33 GTRD no Lung (A549) 108287634
chr17 66507373 66510515 ZBTB33 GTRD no Lung (A549) 108287635
chr17 66507535 66510531 ZNF274 GTRD no Cervix (HeLa-S3) 108287636
chr17 66507717 66510113 POLR2A UCSC Txn Factor no Conserved 108287637
chr17 66507883 66510100 ZNF143 GTRD no Epithelial (MCF-7) 108287638
chr17 66507921 66510196 ZNF143 GTRD no Epithelial (MCF-7) 108287639
chr17 66507940 66510038 ZNF143 GTRD no Epithelial (MCF-7) 108287640
chr17 66507998 66510011 ZNF143 GTRD no Epithelial (MCF-7) 108287641
chr17 66508004 66510243 ZBTB33 GTRD no Lung (A549) 108287642
chr17 66508019 66509705 ZNF143 GTRD no Epithelial (MCF-7) 108287643
chr17 66508023 66509936 ZBTB33 GTRD no Lung (A549) 108287644
chr17 66508023 66509993 ZNF274 GTRD no Cervix (HeLa-S3) 108287645
chr17 66508027 66509384 ZNF143 GTRD no Epithelial (MCF-7) 108287646
chr17 66508044 66509995 ZNF143 GTRD no Epithelial (MCF-7) 108287647
chr17 66508076 66509963 ZNF143 GTRD no Epithelial (MCF-7) 108287648
chr17 66508095 66509427 ZNF143 GTRD no Epithelial (MCF-7) 108287649
chr17 66508110 66509908 ZBTB33 GTRD no Lung (A549) 108287650
chr17 66508122 66510077 ZBTB33 GTRD no Lung (A549) 108287651
chr17 66508162 66509416 ZNF143 GTRD no Epithelial (MCF-7) 108287652
chr17 66508201 66509889 ZBTB33 GTRD no Lung (A549) 108287653
chr17 66508221 66509842 ZNF143 GTRD no Epithelial (MCF-7) 108287654
chr17 66508223 66510068 ZBTB33 GTRD no Lung (A549) 108287655
chr17 66508327 66509865 ZBTB33 GTRD no Brain (SK-N-SH) 108287656
chr17 66508330 66510241 ZNF274 GTRD no Cervix (HeLa-S3) 108287657
chr17 66508336 66510187 ZBTB33 GTRD no Lung (A549) 108287658
chr17 66508359 66510024 ZNF143 GTRD no Epithelial (MCF-7) 108287659
chr17 66508364 66510430 ZNF274 GTRD no Cervix (HeLa-S3) 108287660
chr17 66508387 66511524 TCF7L2 GTRD no Colon (HCT116) 108287661
chr17 66508403 66510128 P63 GTRD no Skin (Keratinocyte) 108287662
chr17 66508419 66509494 ZNF143 GTRD no Epithelial (MCF-7) 108287663
chr17 66508428 66509965 ZBTB33 GTRD no Lung (A549) 108287664
chr17 66508507 66510170 ZNF274 GTRD no Cervix (HeLa-S3) 108287665
chr17 66508573 66510006 TCF7L2 GTRD no Colon (HCT116) 108287666
chr17 66508592 66509499 ZNF143 GTRD no Epithelial (MCF-7) 108287667
chr17 66508599 66510128 TCF7L2 GTRD no Colon (HCT116) 108287668
chr17 66508627 66510165 ZNF274 GTRD no Cervix (HeLa-S3) 108287669
chr17 66508640 66510166 ZNF274 GTRD no Cervix (HeLa-S3) 108287670
chr17 66508647 66509968 ZNF274 GTRD no Cervix (HeLa-S3) 108287671
chr17 66508652 66509375 ZNF143 GTRD no Epithelial (MCF-7) 108287672
chr17 66508675 66509983 ZBTB33 GTRD no Lung (A549) 108287673
chr17 66508697 66509308 ZNF274 GTRD no Cervix (HeLa-S3) 108287674
chr17 66508698 66509945 ZNF143 GTRD no Epithelial (MCF-7) 108287675
chr17 66508705 66509996 ZNF143 GTRD no Epithelial (MCF-7) 108287676
chr17 66508711 66509496 ZNF274 GTRD no Cervix (HeLa-S3) 108287677
chr17 66508717 66510079 ZBTB33 GTRD no Lung (A549) 108287678
chr17 66508720 66509912 ZBTB33 GTRD no Lung (A549) 108287679
chr17 66508730 66510170 TCF7L2 GTRD no Colon (HCT116) 108287680
chr17 66508737 66509905 ZNF143 GTRD no Epithelial (MCF-7) 108287681
chr17 66508738 66509268 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108287682
chr17 66508740 66510010 ZBTB33 GTRD no Lung (A549) 108287683
chr17 66508749 66510007 ZBTB33 GTRD no Lung (A549) 108287684
chr17 66508754 66510268 ZNF274 GTRD no Cervix (HeLa-S3) 108287685
chr17 66508780 66509881 TCF7L2 GTRD no Colon (HCT116) 108287687
chr17 66508781 66510001 ZBTB33 GTRD no Lung (A549) 108287688
chr17 66508783 66510027 TCF7L2 GTRD no Colon (HCT116) 108287689
chr17 66508800 66509324 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108287690
chr17 66508803 66509804 ZBTB33 GTRD no Lung (A549) 108287691
chr17 66508806 66509476 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108287692
chr17 66508810 66509636 ZNF143 GTRD no Epithelial (MCF-7) 108287693
chr17 66508811 66509447 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108287694
chr17 66508815 66509863 ZNF143 GTRD no Epithelial (MCF-7) 108287695
chr17 66508838 66509914 TEF1 GTRD no Bone (Osteoblast) 108287696
chr17 66508870 66510087 ZNF274 GTRD no Cervix (HeLa-S3) 108287698
chr17 66508923 66509335 ZNF143 GTRD no Epithelial (MCF-7) 108287699
chr17 66508966 66509582 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108287700
chr17 66508982 66510117 ZNF274 GTRD no Bone Marrow (K562) 108287701
chr17 66509073 66509617 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108287702
chr17 66509079 66509968 ZNF274 GTRD no Cervix (HeLa-S3) 108287703
chr17 66509095 66509495 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108287704
chr17 66509097 66509453 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108287705
chr17 66509139 66509643 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108287706
chr17 66509142 66510294 ZNF274 GTRD no Bone Marrow (K562) 108287707
chr17 66509161 66509531 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108287708
chr17 66509184 66509704 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108287709
chr17 66509184 66510046 ZNF274 GTRD no Bone Marrow (K562) 108287710
chr17 66509196 66509800 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108287711
chr17 66509205 66510092 ZNF274 GTRD no Bone Marrow (K562) 108287712
chr17 66509212 66509846 ZNF274 GTRD no Bone Marrow (K562) 108287713
chr17 66509229 66509250 ZNF263 JASPAR yes 21282763
chr17 66509230 66509251 ZNF263 JASPAR yes 21282764
chr17 66509235 66509611 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108287714
chr17 66509238 66509252 RXRB JASPAR yes 21282765
chr17 66509238 66509252 RXRG JASPAR yes 21282766
chr17 66509238 66509253 LEF1 JASPAR yes 21282767
chr17 66509238 66509253 NR2C2 JASPAR yes 21282768
chr17 66509239 66509254 PRDM1 JASPAR yes 21282769
chr17 66509239 66509260 ZNF263 JASPAR yes 21282770
chr17 66509243 66509947 ZNF274 GTRD no Cervix (HeLa-S3) 108287715
chr17 66509244 66509265 ZNF263 JASPAR yes 21282771
chr17 66509245 66509260 NR2C2 JASPAR yes 21282772
Genes associated with rs540373162[chr17:66509245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More