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- rs540393640[chr1:223364993]
Enhancers that have rs540393640[chr1:223364993]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
223360465 |
223366995 |
enh27569 |
|
|
Transcript factors that have rs540393640[chr1:223364993]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
223362878
|
223365310
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872952
|
|
|
chr1
|
223362983
|
223365055
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872958
|
|
|
chr1
|
223362989
|
223365047
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872959
|
|
|
chr1
|
223363030
|
223365378
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872963
|
|
|
chr1
|
223363129
|
223365074
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872964
|
|
|
chr1
|
223363326
|
223365525
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872965
|
|
|
chr1
|
223363405
|
223365360
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872967
|
|
|
chr1
|
223363439
|
223365401
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872968
|
|
|
chr1
|
223363523
|
223365102
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107872969
|
|
|
chr1
|
223363523
|
223365107
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872970
|
|
|
chr1
|
223363837
|
223365234
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107873005
|
|
|
chr1
|
223363947
|
223365051
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107873014
|
|
|
chr1
|
223363964
|
223365169
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107873019
|
|
Genes associated with rs540393640[chr1:223364993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |