EnhancerDB
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  3. rs540420141[chr1:46324760]
Enhancers that have rs540420141[chr1:46324760]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46315285 46325515 enh325
Lung (PC-9) Liver (HepG2) Blood (Karpas-422) Epithelial (MCF-7)
Transcript factors that have rs540420141[chr1:46324760]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46324745 46324761 RFX2 JASPAR yes 28622266
chr1 46324745 46324761 RFX3 JASPAR yes 28622267
chr1 46324745 46324761 RFX4 JASPAR yes 28622268
chr1 46324745 46324761 RFX5 JASPAR yes 28622269
chr1 46324746 46324765 RFX2 JASPAR yes 28622270
chr1 46324750 46324760 NFIA JASPAR yes 28622271
chr1 46324751 46324760 NFIX JASPAR yes 28622272
chr1 46324755 46324773 E2F3 JASPAR yes 28622274
chr1 46324756 46324772 E2F2 JASPAR yes 28622275
chr1 46324757 46324767 GCM2 JASPAR yes 28622276
chr1 46324757 46324768 GCM1 JASPAR yes 28622277
Genes associated with rs540420141[chr1:46324760], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More