EnhancerDB
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  3. rs540520281[chr16:12639131]
Enhancers that have rs540520281[chr16:12639131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 12630505 12654813 enh3901
Liver (HepG2) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus
chr16 12638973 12639326 vista21926
VISTA
Transcript factors that have rs540520281[chr16:12639131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 12638666 12639182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691356
chr16 12638666 12639182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183026
chr16 12638706 12639206 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691357
chr16 12638706 12639206 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183027
chr16 12638835 12639428 ZNF274 GTRD no Bone Marrow (K562) 108183028
chr16 12638879 12639243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691358
chr16 12638879 12639243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183029
chr16 12638898 12639238 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21691359
chr16 12638898 12639238 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108183030
chr16 12638912 12639136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691360
chr16 12638912 12639136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183031
chr16 12638915 12639472 ZNF274 GTRD no Bone Marrow (K562) 108183032
chr16 12638919 12639345 ZNF274 GTRD no Liver (HepG2) 21691361
chr16 12638919 12639345 ZNF274 GTRD no Liver (HepG2) 108183033
chr16 12638937 12639284 ZBTB33 GTRD no Brain (SK-N-SH) 108183034
chr16 12638956 12639522 ZNF274 GTRD no Bone Marrow (K562) 108183036
chr16 12638968 12639570 ZNF274 GTRD no Liver (HepG2) 21691363
chr16 12638968 12639570 ZNF274 GTRD no Liver (HepG2) 108183037
chr16 12639018 12639532 ZNF274 GTRD no Cervix (HeLa-S3) 108183038
chr16 12639036 12639482 ZNF274 GTRD no Bone Marrow (K562) 108183039
chr16 12639039 12639451 ZBTB33 GTRD no Brain (SK-N-SH) 108183040
chr16 12639056 12639478 ZNF274 GTRD no Bone Marrow (K562) 108183041
chr16 12639057 12639353 ZNF274 GTRD no Bone Marrow (K562) 108183042
chr16 12639058 12639282 ZNF274 GTRD no Bone Marrow (K562) 108183043
chr16 12639070 12639815 ZNF274 GTRD no Bone Marrow (K562) 108183044
chr16 12639075 12639436 ZNF274 GTRD no Liver (HepG2) 21691364
chr16 12639075 12639436 ZNF274 GTRD no Liver (HepG2) 108183045
chr16 12639082 12639380 ZNF274 GTRD no Blood (GM12878) 21691365
chr16 12639082 12639380 ZNF274 GTRD no Blood (GM12878) 108183046
chr16 12639084 12639317 TCF7L2 GTRD no Colon (HCT116) 108183047
chr16 12639120 12639131 CEBPA JASPAR yes 9589538
chr16 12639120 12639131 CEBPA JASPAR yes 49344732
Genes associated with rs540520281[chr16:12639131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More