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- rs540572472[chr1:172640278]
Enhancers that have rs540572472[chr1:172640278]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
172637585 |
172654275 |
enh50047 |
|
|
Transcript factors that have rs540572472[chr1:172640278]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
172636359
|
172641403
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107845930
|
|
|
chr1
|
172638540
|
172640301
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107845933
|
|
|
chr1
|
172638808
|
172640443
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107845945
|
|
|
chr1
|
172639204
|
172640602
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107845952
|
|
|
chr1
|
172639212
|
172640726
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107845953
|
|
|
chr1
|
172639326
|
172640599
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107845957
|
|
|
chr1
|
172640160
|
172640574
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107845967
|
|
|
chr1
|
172640266
|
172640279
|
EOMES
|
JASPAR
|
yes
|
|
33144042
|
|
|
chr1
|
172640275
|
172640288
|
ZBTB18
|
JASPAR
|
yes
|
|
33144049
|
|
|
chr1
|
172640276
|
172640286
|
MAX
|
JASPAR
|
yes
|
|
33144050
|
|
|
chr1
|
172640276
|
172640287
|
USF2
|
JASPAR
|
yes
|
|
33144051
|
|
|
chr1
|
172640276
|
172640291
|
SCRT1
|
JASPAR
|
yes
|
|
33144052
|
|
|
chr1
|
172640277
|
172640287
|
NEUROD2
|
JASPAR
|
yes
|
|
33144053
|
|
|
chr1
|
172640277
|
172640287
|
NEUROG2
|
JASPAR
|
yes
|
|
33144054
|
|
Genes associated with rs540572472[chr1:172640278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |