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- rs540579300[chr16:29329441]
Enhancers that have rs540579300[chr16:29329441]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
29329125 |
29333275 |
enh92654 |
|
|
Transcript factors that have rs540579300[chr16:29329441]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
29329349
|
29330191
|
CTCF
|
UCSC Txn Factor
|
no
|
Conserved
|
108191493
|
|
|
chr16
|
29329428
|
29329658
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21702393
|
|
|
chr16
|
29329435
|
29329783
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
21702394
|
|
|
chr16
|
29329436
|
29329660
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21702395
|
|
|
chr16
|
29329437
|
29329447
|
ID4
|
JASPAR
|
yes
|
|
10261130
|
|
|
chr16
|
29329437
|
29329447
|
TCF3
|
JASPAR
|
yes
|
|
10261131
|
|
|
chr16
|
29329437
|
29329447
|
TCF4
|
JASPAR
|
yes
|
|
10261132
|
|
|
chr16
|
29329438
|
29329447
|
SNAI2
|
JASPAR
|
yes
|
|
10261133
|
|
|
chr16
|
29329439
|
29329444
|
USF2
|
TRANSFAC
|
yes
|
|
10261134
|
|
Genes associated with rs540579300[chr16:29329441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |