EnhancerDB
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  3. rs540674239[chr3:127333402]
Enhancers that have rs540674239[chr3:127333402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127329925 127334495 enh35864
Astrocyte Thyroid
Transcript factors that have rs540674239[chr3:127333402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 127333393 127333406 POU3F3 JASPAR yes 5534921
chr3 127333396 127333411 MEF2A JASPAR yes 5534922
chr3 127333397 127333407 POU6F2 JASPAR yes 5534923
chr3 127333398 127333408 EMX1 JASPAR yes 5534924
chr3 127333398 127333408 EMX2 JASPAR yes 5534925
chr3 127333398 127333408 EVX1 JASPAR yes 5534926
chr3 127333398 127333408 EVX2 JASPAR yes 5534927
chr3 127333398 127333408 HESX1 JASPAR yes 5534928
chr3 127333398 127333408 HOXA2 JASPAR yes 5534929
chr3 127333398 127333408 HOXB2 JASPAR yes 5534930
chr3 127333398 127333408 LHX2 JASPAR yes 5534931
chr3 127333398 127333408 LHX6 JASPAR yes 5534932
chr3 127333398 127333408 MEOX1 JASPAR yes 5534933
chr3 127333398 127333408 MEOX2 JASPAR yes 5534934
chr3 127333398 127333408 NOTO JASPAR yes 5534935
chr3 127333399 127333407 LBX1 JASPAR yes 5534936
chr3 127333399 127333407 PDX1 JASPAR yes 5534937
chr3 127333399 127333407 VAX1 JASPAR yes 5534938
chr3 127333399 127333407 VAX2 JASPAR yes 5534939
chr3 127333399 127333407 VSX1 JASPAR yes 5534940
chr3 127333399 127333407 VSX2 JASPAR yes 5534941
Genes associated with rs540674239[chr3:127333402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More