EnhancerDB
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  3. rs540708660[chr12:95115059]
Enhancers that have rs540708660[chr12:95115059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 95106026 95121875 enh2520
Prostate (PC-3) Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube)
chr12 95115043 95115252 vista14519
VISTA
Transcript factors that have rs540708660[chr12:95115059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 95114816 95115682 ZNF274 GTRD no Blood (GM12878) 21566638
chr12 95114816 95115682 ZNF274 GTRD no Blood (GM12878) 108052475
chr12 95114850 95115370 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21566639
chr12 95114850 95115370 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108052476
chr12 95114860 95115582 ZNF274 GTRD no Blood (GM12878) 21566640
chr12 95114860 95115582 ZNF274 GTRD no Blood (GM12878) 108052477
chr12 95114896 95115410 ZNF274 GTRD no Blood (GM12878) 21566641
chr12 95114896 95115410 ZNF274 GTRD no Blood (GM12878) 108052478
chr12 95114933 95115263 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21566642
chr12 95114933 95115263 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108052479
chr12 95114964 95115214 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21566643
chr12 95114964 95115214 SPI1 UCSC Txn Factor no Conserved 108052480
chr12 95114964 95115214 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108052481
chr12 95115012 95115499 TCF7L2 GTRD no Colon (HCT116) 108052482
chr12 95115023 95115191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21566644
chr12 95115023 95115191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108052483
chr12 95115028 95115219 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21566645
chr12 95115028 95115219 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108052484
chr12 95115046 95115366 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21566646
chr12 95115046 95115366 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108052485
chr12 95115051 95115062 HOXC12 JASPAR yes 82459063
chr12 95115051 95115062 HOXC12 JASPAR yes 122948904
Genes associated with rs540708660[chr12:95115059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More