EnhancerDB
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  3. rs540865558[chr1:241998937]
Enhancers that have rs540865558[chr1:241998937]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 241996165 242005735 enh12831
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs540865558[chr1:241998937]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 241998132 241999489 ZNF274 GTRD no Cervix (HeLa-S3) 21404803
chr1 241998217 241999588 ZNF274 GTRD no Cervix (HeLa-S3) 21404807
chr1 241998249 241999020 MYOD GTRD no Muscle (Myoblast) 21404808
chr1 241998303 241999438 ZNF274 GTRD no Cervix (HeLa-S3) 21404809
chr1 241998314 241999057 ZNF274 GTRD no Cervix (HeLa-S3) 21404810
chr1 241998346 241999120 ZNF274 GTRD no Cervix (HeLa-S3) 21404811
chr1 241998372 241998956 ZNF274 GTRD no Cervix (HeLa-S3) 21404812
chr1 241998375 241998991 ZNF274 GTRD no Cervix (HeLa-S3) 21404813
chr1 241998399 241998940 ZNF274 GTRD no Cervix (HeLa-S3) 21404814
chr1 241998412 241999010 ZNF274 GTRD no Cervix (HeLa-S3) 21404815
chr1 241998424 241999012 ZNF274 GTRD no Cervix (HeLa-S3) 21404816
chr1 241998426 241999167 ZNF274 GTRD no Cervix (HeLa-S3) 21404817
chr1 241998930 241998938 GATA3 JASPAR yes 36629816
chr1 241998935 241998947 FOXI1 JASPAR yes 36629817
Genes associated with rs540865558[chr1:241998937], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More