EnhancerDB
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  3. rs540948824[chr1:201479995]
Enhancers that have rs540948824[chr1:201479995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201476865 201492055 enh12521
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Muscle (A673) Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs540948824[chr1:201479995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201479637 201483101 ZNF143 GTRD no Epithelial (MCF-7) 21364416
chr1 201479843 201483270 ZNF143 GTRD no Epithelial (MCF-7) 21364417
chr1 201479905 201484267 ZNF143 GTRD no Epithelial (MCF-7) 21364418
chr1 201479946 201481408 ZNF143 GTRD no Epithelial (MCF-7) 21364419
chr1 201479963 201483085 ZNF143 GTRD no Epithelial (MCF-7) 21364420
chr1 201479975 201481532 ZNF143 GTRD no Epithelial (MCF-7) 21364421
chr1 201479980 201479995 MEF2C JASPAR yes 34499852
chr1 201479988 201480004 GLIS1 JASPAR yes 34499855
chr1 201479989 201480003 GLIS2 JASPAR yes 34499856
chr1 201479989 201480003 GLIS3 JASPAR yes 34499857
chr1 201479989 201480003 ZIC1 JASPAR yes 34499858
chr1 201479989 201480004 ZIC3 JASPAR yes 34499859
chr1 201479989 201480004 ZIC4 JASPAR yes 34499860
chr1 201479995 201480008 POU2F2 JASPAR yes 34499861
Genes associated with rs540948824[chr1:201479995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More