-
Home
- SNP
- rs540959556[chr16:10907429]
Enhancers that have rs540959556[chr16:10907429]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
10897375 |
10911080 |
enh60581 |
|
|
Transcript factors that have rs540959556[chr16:10907429]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
10904386
|
10911406
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21688996
|
|
|
chr16
|
10904386
|
10911406
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108178889
|
|
|
chr16
|
10905613
|
10908812
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21688997
|
|
|
chr16
|
10905613
|
10908812
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108178890
|
|
|
chr16
|
10906052
|
10908292
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108178891
|
|
|
chr16
|
10906358
|
10907488
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108178896
|
|
|
chr16
|
10906388
|
10908170
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108178898
|
|
|
chr16
|
10906440
|
10908471
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21689005
|
|
|
chr16
|
10906440
|
10908471
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108178904
|
|
|
chr16
|
10907420
|
10907432
|
PROX1
|
JASPAR
|
yes
|
|
9465284
|
|
|
chr16
|
10907429
|
10907443
|
FOXF2
|
JASPAR
|
yes
|
|
9465285
|
|
Genes associated with rs540959556[chr16:10907429], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |