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- rs540969228[chr1:171712452]
Enhancers that have rs540969228[chr1:171712452]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
171712214 |
171712716 |
vista3871 |
|
|
Transcript factors that have rs540969228[chr1:171712452]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
171708335
|
171713372
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
107845465
|
|
|
chr1
|
171712191
|
171712587
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107845468
|
|
|
chr1
|
171712211
|
171712587
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107845469
|
|
|
chr1
|
171712257
|
171712547
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107845470
|
|
|
chr1
|
171712270
|
171712654
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107845472
|
|
|
chr1
|
171712277
|
171712541
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107845473
|
|
|
chr1
|
171712313
|
171712505
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107845474
|
|
|
chr1
|
171712389
|
171712619
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107845475
|
|
|
chr1
|
171712394
|
171712650
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
107845476
|
|
|
chr1
|
171712417
|
171712661
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107845477
|
|
|
chr1
|
171712420
|
171712776
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
107845478
|
|
Genes associated with rs540969228[chr1:171712452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |