EnhancerDB
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  3. rs541144952[chr19:6802178]
Enhancers that have rs541144952[chr19:6802178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6776269 6806348 enh4990
Prostate (PC-3) Brain (SK-N-MC) Blood (T-cell) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Thymus Heart
Transcript factors that have rs541144952[chr19:6802178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6799439 6802203 ZNF274 GTRD no Blood (GM12878) 108380059
chr19 6799518 6802202 ZNF274 GTRD no Blood (GM12878) 108380060
chr19 6799792 6804117 ZNF274 GTRD no Blood (GM12878) 108380061
chr19 6799792 6804117 ZNF274 GTRD no Blood (GM12878) 108380062
chr19 6799792 6804117 ZNF274 GTRD no Blood (GM12878) 108380063
chr19 6800365 6802246 ZNF274 GTRD no Blood (GM12878) 108380065
chr19 6800569 6802257 ZBTB33 GTRD no Lung (A549) 108380066
chr19 6800606 6802188 ZBTB33 GTRD no Lung (A549) 108380067
chr19 6800628 6802215 ZBTB33 GTRD no Lung (A549) 108380068
chr19 6800644 6802192 ZBTB33 GTRD no Lung (A549) 108380069
chr19 6800759 6803651 ZNF274 GTRD no Blood (GM12878) 108380075
chr19 6800759 6803651 ZNF274 GTRD no Blood (GM12878) 108380076
chr19 6800759 6803651 ZNF274 GTRD no Blood (GM12878) 108380077
chr19 6800761 6802204 ZBTB33 GTRD no Lung (A549) 108380078
chr19 6800789 6802246 TCF7L2 GTRD no Colon (HCT116) 21846136
chr19 6800789 6802246 TCF7L2 GTRD no Colon (HCT116) 108380084
chr19 6800790 6802185 ZNF274 GTRD no Blood (GM12878) 108380087
chr19 6800794 6803025 TCF7L2 GTRD no Colon (HCT116) 21846138
chr19 6800794 6803025 TCF7L2 GTRD no Colon (HCT116) 108380089
chr19 6800794 6803025 TCF7L2 GTRD no Colon (HCT116) 108380090
chr19 6800796 6802294 ZBTB33 GTRD no Lung (A549) 108380092
chr19 6800804 6802274 ZNF274 GTRD no Blood (GM12878) 108380097
chr19 6800807 6802209 ZNF274 GTRD no Blood (GM12878) 108380099
chr19 6800811 6802966 TCF7L2 GTRD no Colon (HCT116) 21846139
chr19 6800811 6802966 TCF7L2 GTRD no Colon (HCT116) 108380102
chr19 6800811 6802966 TCF7L2 GTRD no Colon (HCT116) 108380103
chr19 6800831 6802202 ZNF274 GTRD no Blood (GM12878) 108380105
chr19 6800841 6802187 STAT3 GTRD no Blood (OCI-LY7) 21846140
chr19 6800841 6802187 STAT3 GTRD no Blood (OCI-LY7) 108380107
chr19 6800856 6802208 ZNF274 GTRD no Blood (GM12878) 108380112
chr19 6800865 6802295 ZNF274 GTRD no Blood (GM12878) 108380117
chr19 6800891 6802197 ZNF274 GTRD no Blood (GM12878) 108380120
chr19 6800903 6802185 ZNF274 GTRD no Blood (GM12878) 108380127
chr19 6800907 6802253 ZNF274 GTRD no Blood (GM12878) 108380128
chr19 6800913 6802201 ZBTB33 GTRD no Lung (A549) 108380132
chr19 6800918 6802231 ZNF274 GTRD no Liver (HepG2) 108380134
chr19 6800928 6802188 ZNF274 GTRD no Blood (GM12878) 108380140
chr19 6800965 6802203 ZNF274 GTRD no Blood (GM12878) 108380151
chr19 6801094 6802926 ZNF274 GTRD no Blood (GM12878) 108380167
chr19 6801094 6802926 ZNF274 GTRD no Blood (GM12878) 108380168
chr19 6801102 6802249 ZNF274 GTRD no Blood (GM12878) 108380172
chr19 6801117 6802274 ZNF274 GTRD no Blood (GM12878) 108380174
chr19 6801146 6802185 FLI1 GTRD no Muscle (A673) 21846143
chr19 6801146 6802185 FLI1 GTRD no Muscle (A673) 108380177
chr19 6801158 6802207 ZNF274 GTRD no Blood (GM12878) 108380179
chr19 6801244 6802202 ZNF274 GTRD no Liver (HepG2) 108380190
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380191
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380192
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380193
chr19 6801275 6802257 TCF7L2 GTRD no Colon (HCT116) 21846149
chr19 6801275 6802257 TCF7L2 GTRD no Colon (HCT116) 108380200
chr19 6801360 6802203 TCF7L2 GTRD no Colon (HCT116) 21846155
chr19 6801360 6802203 TCF7L2 GTRD no Colon (HCT116) 108380218
chr19 6802146 6803318 ZNF274 GTRD no Bone Marrow (K562) 108380238
chr19 6802146 6803318 ZNF274 GTRD no Bone Marrow (K562) 108380239
chr19 6802149 6802797 ZNF274 GTRD no Bone Marrow (K562) 108380240
Genes associated with rs541144952[chr19:6802178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More