EnhancerDB
  1. Home
  2. SNP
  3. rs541258233[chr16:85749424]
Enhancers that have rs541258233[chr16:85749424]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85746708 85760055 enh16876
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Breast Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs541258233[chr16:85749424]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85748962 85752038 ZNF143 GTRD no Epithelial (MCF-7) 21730871
chr16 85748962 85752038 ZNF143 GTRD no Epithelial (MCF-7) 108216959
chr16 85749179 85752089 TCF7L2 GTRD no Colon (HCT116) 108216960
chr16 85749189 85752083 TCF7L2 GTRD no Colon (HCT116) 108216961
chr16 85749192 85754767 ZNF143 GTRD no Epithelial (MCF-7) 21730872
chr16 85749192 85754767 ZNF143 GTRD no Epithelial (MCF-7) 108216962
chr16 85749292 85755128 ZNF143 GTRD no Epithelial (MCF-7) 21730873
chr16 85749292 85755128 ZNF143 GTRD no Epithelial (MCF-7) 108216963
chr16 85749336 85751602 ZNF143 GTRD no Epithelial (MCF-7) 21730874
chr16 85749336 85751602 ZNF143 GTRD no Epithelial (MCF-7) 108216964
chr16 85749337 85753743 ZNF143 GTRD no Epithelial (MCF-7) 21730875
chr16 85749337 85753743 ZNF143 GTRD no Epithelial (MCF-7) 108216965
chr16 85749346 85752051 ZNF143 GTRD no Epithelial (MCF-7) 21730876
chr16 85749346 85752051 ZNF143 GTRD no Epithelial (MCF-7) 108216966
chr16 85749350 85751393 ZNF143 GTRD no Epithelial (MCF-7) 21730877
chr16 85749350 85751393 ZNF143 GTRD no Epithelial (MCF-7) 108216967
chr16 85749368 85753624 ZNF143 GTRD no Epithelial (MCF-7) 21730878
chr16 85749368 85753624 ZNF143 GTRD no Epithelial (MCF-7) 108216968
chr16 85749377 85751686 ZNF143 GTRD no Epithelial (MCF-7) 21730879
chr16 85749377 85751686 ZNF143 GTRD no Epithelial (MCF-7) 108216969
chr16 85749419 85749433 E2F7 JASPAR yes 12091062
chr16 85749422 85751801 TCF7L2 GTRD no Colon (HCT116) 108216970
chr16 85749423 85749432 NFIX JASPAR yes 12091063
chr16 85749423 85749433 NFIA JASPAR yes 12091064
chr16 85749424 85749439 MEF2C JASPAR yes 12091065
chr16 85749424 85749445 IRF1 JASPAR yes 12091066
Genes associated with rs541258233[chr16:85749424], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More