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- rs541596140[chr17:80068378]
Enhancers that have rs541596140[chr17:80068378]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
80068190 |
80068440 |
vista26441 |
|
|
Transcript factors that have rs541596140[chr17:80068378]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
80067360
|
80069454
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108310968
|
|
|
chr17
|
80067360
|
80069454
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108310969
|
|
|
chr17
|
80068137
|
80069346
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310970
|
|
|
chr17
|
80068137
|
80069346
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310971
|
|
|
chr17
|
80068167
|
80069179
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310972
|
|
|
chr17
|
80068167
|
80069179
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310973
|
|
|
chr17
|
80068178
|
80068458
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310974
|
|
|
chr17
|
80068180
|
80068580
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310975
|
|
|
chr17
|
80068183
|
80068473
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310976
|
|
|
chr17
|
80068186
|
80069131
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310977
|
|
|
chr17
|
80068186
|
80069131
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310978
|
|
|
chr17
|
80068220
|
80069505
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108310979
|
|
|
chr17
|
80068220
|
80069505
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108310980
|
|
|
chr17
|
80068228
|
80069185
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310981
|
|
|
chr17
|
80068228
|
80069185
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310982
|
|
|
chr17
|
80068230
|
80068494
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310983
|
|
|
chr17
|
80068238
|
80069489
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108310984
|
|
|
chr17
|
80068238
|
80069489
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108310985
|
|
|
chr17
|
80068243
|
80069268
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310986
|
|
|
chr17
|
80068243
|
80069268
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310987
|
|
|
chr17
|
80068254
|
80068514
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310988
|
|
|
chr17
|
80068277
|
80068553
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310989
|
|
|
chr17
|
80068277
|
80069045
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310990
|
|
|
chr17
|
80068277
|
80069045
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310991
|
|
|
chr17
|
80068282
|
80068538
|
USF1
|
UCSC Txn Factor
|
no
|
Conserved
|
108310992
|
|
|
chr17
|
80068290
|
80069213
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310993
|
|
|
chr17
|
80068290
|
80069213
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310994
|
|
|
chr17
|
80068294
|
80069216
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310995
|
|
|
chr17
|
80068294
|
80069216
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310996
|
|
|
chr17
|
80068299
|
80069286
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310997
|
|
|
chr17
|
80068299
|
80069286
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310998
|
|
|
chr17
|
80068302
|
80068460
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310999
|
|
|
chr17
|
80068311
|
80069376
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108311000
|
|
|
chr17
|
80068311
|
80069376
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108311001
|
|
|
chr17
|
80068312
|
80069063
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108311002
|
|
|
chr17
|
80068312
|
80069063
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108311003
|
|
|
chr17
|
80068313
|
80069476
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108311004
|
|
|
chr17
|
80068313
|
80069476
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108311005
|
|
|
chr17
|
80068372
|
80068383
|
NFE2
|
JASPAR
|
yes
|
|
21320900
|
|
|
chr17
|
80068373
|
80068382
|
JDP2
|
JASPAR
|
yes
|
|
21320901
|
|
|
chr17
|
80068373
|
80069309
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108311006
|
|
|
chr17
|
80068373
|
80069309
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108311007
|
|
Genes associated with rs541596140[chr17:80068378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |