EnhancerDB
  1. Home
  2. SNP
  3. rs541910664[chr1:20086561]
Enhancers that have rs541910664[chr1:20086561]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20081105 20095655 enh26567
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube)
Transcript factors that have rs541910664[chr1:20086561]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20086547 20086562 TFAP2A JASPAR yes 27215512
chr1 20086547 20086562 TFAP2C JASPAR yes 27215513
chr1 20086549 20086563 EBF1 JASPAR yes 27215514
chr1 20086550 20086561 EBF1 JASPAR yes 27215515
chr1 20086550 20086562 TFAP2A JASPAR yes 27215516
chr1 20086550 20086562 TFAP2B JASPAR yes 27215517
chr1 20086550 20086562 TFAP2C JASPAR yes 27215518
chr1 20086550 20086564 EBF1 JASPAR yes 27215519
chr1 20086552 20086563 EBF1 JASPAR yes 27215520
chr1 20086556 20086577 ZNF263 JASPAR yes 27215521
Genes associated with rs541910664[chr1:20086561], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More