EnhancerDB
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  3. rs541960405[chr2:40064284]
Enhancers that have rs541960405[chr2:40064284]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 40063085 40068795 enh91263
Bone Marrow (K562) Peripheral Blood (MM.1S)
Transcript factors that have rs541960405[chr2:40064284]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 40064263 40064284 IRF1 JASPAR yes 73229467
chr2 40064267 40064287 RREB1 JASPAR yes 73229469
chr2 40064268 40064289 IRF1 JASPAR yes 73229470
chr2 40064270 40064285 STAT2 JASPAR yes 73229471
chr2 40064272 40064284 IRF1 JASPAR yes 73229472
chr2 40064272 40064286 IRF7 JASPAR yes 73229473
chr2 40064272 40064287 IRF9 JASPAR yes 73229474
chr2 40064273 40064294 IRF1 JASPAR yes 73229475
chr2 40064274 40064289 FOXP1 JASPAR yes 73229477
chr2 40064274 40064295 IRF1 JASPAR yes 73229478
chr2 40064275 40064284 SRY JASPAR yes 73229479
chr2 40064275 40064286 FOXP2 JASPAR yes 73229480
chr2 40064275 40064287 FOXC2 JASPAR yes 73229481
chr2 40064275 40064290 STAT2 JASPAR yes 73229482
chr2 40064276 40064287 FOXC1 JASPAR yes 73229483
chr2 40064277 40064288 FOXA1 JASPAR yes 73229484
chr2 40064278 40064299 IRF1 JASPAR yes 73229485
chr2 40064279 40064294 FOXP1 JASPAR yes 73229486
chr2 40064279 40064300 IRF1 JASPAR yes 73229487
chr2 40064280 40064301 IRF1 JASPAR yes 73229488
chr2 40064281 40064296 FOXP1 JASPAR yes 73229489
chr2 40064281 40064302 IRF1 JASPAR yes 73229490
chr2 40064282 40064303 IRF1 JASPAR yes 73229491
chr2 40064283 40064298 FOXP1 JASPAR yes 73229492
chr2 40064284 40064299 FOXP1 JASPAR yes 73229493
Genes associated with rs541960405[chr2:40064284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More