EnhancerDB
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  3. rs542247339[chr19:13138126]
Enhancers that have rs542247339[chr19:13138126]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138013 13138252 vista28676
VISTA
Transcript factors that have rs542247339[chr19:13138126]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13136845 13138859 ZNF143 GTRD no Epithelial (MCF-7) 21850164
chr19 13136845 13138859 ZNF143 GTRD no Epithelial (MCF-7) 108387442
chr19 13136845 13138859 ZNF143 GTRD no Epithelial (MCF-7) 108387443
chr19 13137700 13139751 TCF7L2 GTRD no Colon (HCT116) 21850165
chr19 13137700 13139751 TCF7L2 GTRD no Colon (HCT116) 108387471
chr19 13137716 13139203 TCF7L2 GTRD no Colon (HCT116) 21850166
chr19 13137716 13139203 TCF7L2 GTRD no Colon (HCT116) 108387472
chr19 13137788 13138604 TCF7L2 GTRD no Colon (HCT116) 108387473
chr19 13137819 13139381 TCF7L2 GTRD no Colon (HCT116) 21850167
chr19 13137819 13139381 TCF7L2 GTRD no Colon (HCT116) 108387474
chr19 13137895 13138737 ZNF143 GTRD no Epithelial (MCF-7) 108387475
chr19 13138056 13139319 TCF7L2 GTRD no Colon (HCT116) 21850168
chr19 13138056 13139319 TCF7L2 GTRD no Colon (HCT116) 108387476
chr19 13138079 13138657 TCF7L2 GTRD no Colon (HCT116) 108387477
chr19 13138106 13138818 ZNF274 GTRD no Bone Marrow (K562) 108387478
chr19 13138107 13138128 IRF1 JASPAR yes 70807752
chr19 13138115 13138504 ZNF274 GTRD no Bone Marrow (K562) 108387479
chr19 13138123 13138138 FOXP1 JASPAR yes 70807753
Genes associated with rs542247339[chr19:13138126], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More