EnhancerDB
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  3. rs542288986[chr19:1327827]
Enhancers that have rs542288986[chr19:1327827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1302385 1328100 enh32871
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Colon (HCT116) Lung (PC-9) Pancreas
Transcript factors that have rs542288986[chr19:1327827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1327812 1327828 POU4F2 JASPAR yes 112010709
chr19 1327812 1327828 POU4F3 JASPAR yes 112010710
chr19 1327813 1327828 FOXA1 JASPAR yes 112010712
chr19 1327814 1327828 POU4F1 JASPAR yes 112010714
chr19 1327814 1327829 FOXP1 JASPAR yes 112010715
chr19 1327814 1327829 HNF1A JASPAR yes 112010716
chr19 1327815 1327827 FOXC2 JASPAR yes 112010717
chr19 1327815 1327829 ONECUT2 JASPAR yes 112010718
chr19 1327815 1327829 ONECUT3 JASPAR yes 112010719
chr19 1327816 1327827 FOXB1 JASPAR yes 112010720
chr19 1327816 1327827 FOXC1 JASPAR yes 112010721
chr19 1327816 1327827 PROP1 JASPAR yes 112010722
chr19 1327817 1327832 FOXA1 JASPAR yes 112010724
chr19 1327818 1327830 FOXI1 JASPAR yes 112010725
chr19 1327818 1327833 FOXP1 JASPAR yes 112010726
chr19 1327819 1327831 FOXC2 JASPAR yes 112010727
chr19 1327819 1327833 ONECUT2 JASPAR yes 112010728
chr19 1327819 1327833 ONECUT3 JASPAR yes 112010729
chr19 1327820 1327831 FOXB1 JASPAR yes 112010730
chr19 1327820 1327831 FOXC1 JASPAR yes 112010731
chr19 1327823 1327835 MEF2D JASPAR yes 112010733
chr19 1327825 1327829 YY1 TRANSFAC yes 112010734
Genes associated with rs542288986[chr19:1327827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More