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- rs542300064[chr17:80293078]
Enhancers that have rs542300064[chr17:80293078]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
80292742 |
80293207 |
vista26461 |
|
|
Transcript factors that have rs542300064[chr17:80293078]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
80292195
|
80293178
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108311946
|
|
|
chr17
|
80292244
|
80293161
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108311947
|
|
|
chr17
|
80292318
|
80293148
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108311948
|
|
|
chr17
|
80292475
|
80293155
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108311950
|
|
|
chr17
|
80292522
|
80293281
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108311953
|
|
|
chr17
|
80292531
|
80293230
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108311955
|
|
|
chr17
|
80292588
|
80293232
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108311958
|
|
|
chr17
|
80292602
|
80293148
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108311959
|
|
|
chr17
|
80292663
|
80293153
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108311964
|
|
|
chr17
|
80292668
|
80293079
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108311965
|
|
|
chr17
|
80292682
|
80293123
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108311967
|
|
|
chr17
|
80292682
|
80293130
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108311968
|
|
|
chr17
|
80292748
|
80293094
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108311971
|
|
|
chr17
|
80292776
|
80293151
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108311972
|
|
|
chr17
|
80292792
|
80293155
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108311975
|
|
|
chr17
|
80292854
|
80293318
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
108311976
|
|
|
chr17
|
80292869
|
80293345
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108311977
|
|
|
chr17
|
80292900
|
80293210
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108311978
|
|
|
chr17
|
80292949
|
80293305
|
IRF1
|
UCSC Txn Factor
|
no
|
Conserved
|
108311979
|
|
|
chr17
|
80292972
|
80293348
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108311980
|
|
|
chr17
|
80293009
|
80293285
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108311981
|
|
|
chr17
|
80293023
|
80293287
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108311982
|
|
|
chr17
|
80293073
|
80293087
|
GLIS2
|
JASPAR
|
yes
|
|
21322052
|
|
Genes associated with rs542300064[chr17:80293078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |