EnhancerDB
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  3. rs542409238[chr1:11746877]
Enhancers that have rs542409238[chr1:11746877]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 11738725 11747535 enh64
Muscle (A673) Brain (SK-N-MC) Blood (Karpas-422)
Transcript factors that have rs542409238[chr1:11746877]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 11746862 11746877 FOXP1 JASPAR yes 26784051
chr1 11746863 11746878 FOXP1 JASPAR yes 26784053
chr1 11746863 11746884 IRF1 JASPAR yes 26784054
chr1 11746864 11746879 FOXP1 JASPAR yes 26784055
chr1 11746864 11746885 IRF1 JASPAR yes 26784056
chr1 11746865 11746880 FOXP1 JASPAR yes 26784057
chr1 11746865 11746886 IRF1 JASPAR yes 26784058
chr1 11746866 11746881 FOXP1 JASPAR yes 26784059
chr1 11746866 11746887 IRF1 JASPAR yes 26784060
chr1 11746867 11746882 FOXP1 JASPAR yes 26784061
chr1 11746867 11746888 IRF1 JASPAR yes 26784062
chr1 11746868 11746883 FOXP1 JASPAR yes 26784063
chr1 11746868 11746889 IRF1 JASPAR yes 26784064
chr1 11746869 11746884 FOXP1 JASPAR yes 26784065
chr1 11746869 11746890 IRF1 JASPAR yes 26784066
chr1 11746870 11746885 FOXP1 JASPAR yes 26784067
chr1 11746870 11746891 IRF1 JASPAR yes 26784068
chr1 11746871 11746886 FOXP1 JASPAR yes 26784069
chr1 11746872 11746887 FOXP1 JASPAR yes 26784070
chr1 11746873 11746888 FOXP1 JASPAR yes 26784071
chr1 11746873 11746894 IRF1 JASPAR yes 26784072
chr1 11746874 11746889 FOXP1 JASPAR yes 26784073
chr1 11746877 11746892 STAT2 JASPAR yes 26784074
Genes associated with rs542409238[chr1:11746877], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More