EnhancerDB
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  3. rs542445786[chr12:54553220]
Enhancers that have rs542445786[chr12:54553220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54550923 54557695 enh2374
Bone Marrow (K562) Brain (SK-N-SH) Large Intestine Ovary Blood (Karpas-422) Kidney
Transcript factors that have rs542445786[chr12:54553220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54552937 54553241 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550232
chr12 54552990 54553226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550233
chr12 54552993 54553317 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550234
chr12 54552994 54553264 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550235
chr12 54552995 54553239 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550236
chr12 54553007 54553324 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550237
chr12 54553018 54553288 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550238
chr12 54553208 54553225 RARA JASPAR yes 121027035
chr12 54553217 54553228 ESRRA JASPAR yes 121027036
chr12 54553217 54553228 ESRRB JASPAR yes 121027037
chr12 54553219 54553229 RORA JASPAR yes 121027038
Genes associated with rs542445786[chr12:54553220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More