EnhancerDB
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  3. rs542477526[chr1:38526071]
Enhancers that have rs542477526[chr1:38526071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38522945 38541879 enh26636
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Embryonic Stem Cell Line (H1-hESC)
Transcript factors that have rs542477526[chr1:38526071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38526062 38526075 TFAP2A JASPAR yes 28193101
chr1 38526062 38526075 TFAP2B JASPAR yes 28193102
chr1 38526062 38526075 TFAP2C JASPAR yes 28193103
chr1 38526062 38526076 ZIC1 JASPAR yes 28193104
chr1 38526062 38526077 ZIC3 JASPAR yes 28193105
chr1 38526062 38526077 ZIC4 JASPAR yes 28193106
chr1 38526063 38526076 TFAP2A JASPAR yes 28193107
chr1 38526063 38526076 TFAP2B JASPAR yes 28193108
chr1 38526063 38526076 TFAP2C JASPAR yes 28193109
chr1 38526064 38526076 TFAP2A JASPAR yes 28193110
chr1 38526064 38526076 TFAP2B JASPAR yes 28193111
chr1 38526064 38526076 TFAP2C JASPAR yes 28193112
chr1 38526066 38526075 TFAP2A JASPAR yes 28193113
chr1 38526070 38526080 NFKB1 JASPAR yes 28193114
chr1 38526070 38526081 NFKB1 JASPAR yes 28193115
Genes associated with rs542477526[chr1:38526071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More