EnhancerDB
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  3. rs542541640[chr1:9334569]
Enhancers that have rs542541640[chr1:9334569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9333529 9345537 enh26524
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus
Transcript factors that have rs542541640[chr1:9334569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9334556 9334571 NR2C2 JASPAR yes 26633733
chr1 9334562 9334578 GLIS1 JASPAR yes 26633734
Genes associated with rs542541640[chr1:9334569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More