EnhancerDB
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  3. rs542577[chr1:111318191]
Enhancers that have rs542577[chr1:111318191]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 111309365 111332595 enh12138
Brain (SK-N-MC) Blood (T-cell) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs542577[chr1:111318191]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 111318182 111318192 POU6F2 JASPAR yes 31497012
chr1 111318183 111318193 GSX1 JASPAR yes 31497013
chr1 111318183 111318193 GSX2 JASPAR yes 31497014
chr1 111318183 111318193 LHX2 JASPAR yes 31497015
chr1 111318183 111318193 MEOX1 JASPAR yes 31497016
chr1 111318183 111318193 MEOX2 JASPAR yes 31497017
chr1 111318183 111318193 MNX1 JASPAR yes 31497018
chr1 111318183 111318195 MEF2A JASPAR yes 31497019
chr1 111318184 111318192 LBX1 JASPAR yes 31497020
chr1 111318184 111318192 PDX1 JASPAR yes 31497021
chr1 111318184 111318192 VAX1 JASPAR yes 31497022
chr1 111318184 111318192 VAX2 JASPAR yes 31497023
chr1 111318184 111318192 VSX1 JASPAR yes 31497024
chr1 111318184 111318192 VSX2 JASPAR yes 31497025
chr1 111318184 111318194 MEF2A JASPAR yes 31497026
chr1 111318185 111318196 NFIL3 JASPAR yes 31497027
chr1 111318185 111318196 PHOX2A JASPAR yes 31497028
chr1 111318185 111318196 PROP1 JASPAR yes 31497029
chr1 111318189 111318210 IRF1 JASPAR yes 31497030
chr1 111318191 111318195 TEAD2 TRANSFAC yes 31497031
chr1 111318191 111318196 TBP TRANSFAC yes 31497032
chr1 111318191 111318197 TFIID TRANSFAC yes 31497033
chr1 111318191 111318206 IRF9 JASPAR yes 31497034
Genes associated with rs542577[chr1:111318191], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More