-
Home
- SNP
- rs542590583[chr2:28731666]
Enhancers that have rs542590583[chr2:28731666]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr2 |
28728445 |
28736375 |
enh18389 |
|
|
Transcript factors that have rs542590583[chr2:28731666]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr2
|
28731659
|
28731669
|
RORA
|
JASPAR
|
yes
|
|
72655509
|
|
|
chr2
|
28731660
|
28731673
|
NR2F1
|
JASPAR
|
yes
|
|
72655510
|
|
|
chr2
|
28731663
|
28731674
|
CDX2
|
JASPAR
|
yes
|
|
72655511
|
|
|
chr2
|
28731664
|
28731668
|
ESR1
|
TRANSFAC
|
yes
|
|
72655512
|
|
|
chr2
|
28731664
|
28731675
|
HOXA10
|
JASPAR
|
yes
|
|
72655513
|
|
|
chr2
|
28731664
|
28731675
|
HOXC11
|
JASPAR
|
yes
|
|
72655514
|
|
|
chr2
|
28731664
|
28731675
|
HOXC12
|
JASPAR
|
yes
|
|
72655515
|
|
|
chr2
|
28731664
|
28731675
|
HOXD12
|
JASPAR
|
yes
|
|
72655516
|
|
|
chr2
|
28731665
|
28731674
|
CDX1
|
JASPAR
|
yes
|
|
72655517
|
|
|
chr2
|
28731665
|
28731675
|
HOXC10
|
JASPAR
|
yes
|
|
72655518
|
|
Genes associated with rs542590583[chr2:28731666], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |