EnhancerDB
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  3. rs542611841[chr1:236109831]
Enhancers that have rs542611841[chr1:236109831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
chr1 236109486 236110063 vista5732
VISTA
Transcript factors that have rs542611841[chr1:236109831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236108551 236110321 ZBTB33 GTRD no Lung (A549) 107886377
chr1 236108944 236110293 ZBTB33 GTRD no Lung (A549) 107886378
chr1 236108946 236110024 ZNF274 GTRD no Bone Marrow (K562) 107886379
chr1 236108947 236110120 ZBTB33 GTRD no Lung (A549) 107886380
chr1 236108949 236110285 ZNF274 GTRD no Bone Marrow (K562) 107886381
chr1 236109071 236110190 ZNF143 GTRD no Epithelial (MCF-7) 107886385
chr1 236109080 236110403 ZNF143 GTRD no Epithelial (MCF-7) 107886386
chr1 236109085 236109990 ZNF274 GTRD no Liver (HepG2) 107886387
chr1 236109088 236109954 CTCF GTRD no Spleen 107886388
chr1 236109106 236109952 ZNF274 GTRD no Blood (GM12878) 21404048
chr1 236109106 236109952 ZNF274 GTRD no Blood (GM12878) 107886389
chr1 236109108 236109961 ZNF274 GTRD no Blood (GM12878) 21404049
chr1 236109108 236109961 ZNF274 GTRD no Blood (GM12878) 107886390
chr1 236109108 236110042 ZNF274 GTRD no Blood (GM12878) 21404050
chr1 236109108 236110042 ZNF274 GTRD no Blood (GM12878) 107886391
chr1 236109109 236110442 ZNF274 GTRD no Cervix (HeLa-S3) 107886392
chr1 236109120 236110350 ZNF143 GTRD no Epithelial (MCF-7) 107886396
chr1 236109126 236109887 ZNF274 GTRD no Bone Marrow (K562) 107886398
chr1 236109126 236109913 ZNF274 GTRD no Liver (HepG2) 107886399
chr1 236109138 236110332 ZNF274 GTRD no Blood (GM12878) 21404051
chr1 236109138 236110332 ZNF274 GTRD no Blood (GM12878) 107886401
chr1 236109142 236110143 ZNF274 GTRD no Bone Marrow (K562) 107886402
chr1 236109147 236109995 ZBTB33 GTRD no Lung (A549) 107886403
chr1 236109159 236110002 ZNF274 GTRD no Bone Marrow (K562) 107886405
chr1 236109160 236110047 ZNF274 GTRD no Liver (HepG2) 107886406
chr1 236109165 236110217 ZNF143 GTRD no Epithelial (MCF-7) 107886407
chr1 236109166 236110264 ZNF274 GTRD no Bone Marrow (K562) 107886408
chr1 236109170 236110000 ZNF274 GTRD no Blood (GM12878) 21404052
chr1 236109170 236110000 ZNF274 GTRD no Blood (GM12878) 107886409
chr1 236109174 236110464 ZNF274 GTRD no Blood (GM12878) 21404053
chr1 236109174 236110464 ZNF274 GTRD no Blood (GM12878) 107886410
chr1 236109188 236109878 CTCF GTRD no Lung 107886411
chr1 236109195 236110109 ZNF274 GTRD no Blood (GM12878) 21404054
chr1 236109195 236110109 ZNF274 GTRD no Blood (GM12878) 107886414
chr1 236109196 236109861 ZNF274 GTRD no Bone Marrow (K562) 107886415
chr1 236109197 236109960 ZNF274 GTRD no Blood (GM12878) 21404055
chr1 236109197 236109960 ZNF274 GTRD no Blood (GM12878) 107886417
chr1 236109198 236110252 ZNF274 GTRD no Blood (GM12878) 21404056
chr1 236109198 236110252 ZNF274 GTRD no Blood (GM12878) 107886418
chr1 236109199 236110046 ZBTB33 GTRD no Lung (A549) 107886419
chr1 236109208 236109952 ZBTB33 GTRD no Lung (A549) 107886420
chr1 236109211 236109852 ZNF143 GTRD no Epithelial (MCF-7) 107886421
chr1 236109222 236110467 ZNF274 GTRD no Bone Marrow (K562) 107886422
chr1 236109225 236110240 ZNF143 GTRD no Epithelial (MCF-7) 107886423
chr1 236109243 236110233 ZNF274 GTRD no Bone Marrow (K562) 107886424
chr1 236109247 236109972 ZNF274 GTRD no Bone Marrow (K562) 107886425
chr1 236109263 236110292 ZNF274 GTRD no Blood (GM12878) 21404057
chr1 236109263 236110292 ZNF274 GTRD no Blood (GM12878) 107886427
chr1 236109280 236109948 ZNF274 GTRD no Blood (GM12878) 21404058
chr1 236109280 236109948 ZNF274 GTRD no Blood (GM12878) 107886432
chr1 236109304 236110044 ZNF274 GTRD no Bone Marrow (K562) 107886434
chr1 236109305 236110039 ZNF274 GTRD no Bone Marrow (K562) 107886435
chr1 236109306 236110022 ZNF274 GTRD no Blood (GM12878) 21404059
chr1 236109306 236110022 ZNF274 GTRD no Blood (GM12878) 107886436
chr1 236109308 236109957 ZNF274 GTRD no Bone Marrow (K562) 107886437
chr1 236109310 236109885 ZNF274 GTRD no Liver (HepG2) 107886438
chr1 236109310 236109893 ZBTB33 GTRD no Lung (A549) 107886439
chr1 236109318 236110944 ZNF143 GTRD no Epithelial (MCF-7) 107886443
chr1 236109321 236110072 ZNF274 GTRD no Cervix (HeLa-S3) 107886445
chr1 236109332 236109835 ZNF274 GTRD no Blood (GM12878) 21404060
chr1 236109332 236109835 ZNF274 GTRD no Blood (GM12878) 107886449
chr1 236109335 236110140 ZNF274 GTRD no Blood (GM12878) 21404061
chr1 236109335 236110140 ZNF274 GTRD no Blood (GM12878) 107886450
chr1 236109337 236109928 ZNF274 GTRD no Blood (GM12878) 21404062
chr1 236109337 236109928 ZNF274 GTRD no Blood (GM12878) 107886452
chr1 236109340 236109835 ZNF274 GTRD no Cervix (HeLa-S3) 107886455
chr1 236109356 236110295 ZNF274 GTRD no Blood (GM12878) 21404063
chr1 236109356 236110295 ZNF274 GTRD no Blood (GM12878) 107886459
chr1 236109587 236109907 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21404065
chr1 236109587 236109907 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107886465
chr1 236109592 236110215 ZNF274 GTRD no Bone Marrow (K562) 107886466
chr1 236109617 236110182 ZNF274 GTRD no Bone Marrow (K562) 107886467
chr1 236109635 236110231 TCF7L2 GTRD no Colon (HCT116) 107886468
chr1 236109644 236110089 ZNF274 GTRD no Blood (GM12878) 21404066
chr1 236109644 236110089 ZNF274 GTRD no Blood (GM12878) 107886469
chr1 236109690 236110471 ZNF143 GTRD no Epithelial (MCF-7) 107886470
chr1 236109799 236110273 ZNF274 GTRD no Blood (GM12878) 21404067
chr1 236109799 236110273 ZNF274 GTRD no Blood (GM12878) 107886471
chr1 236109815 236110221 CTCF UCSC Txn Factor no Conserved 107886472
chr1 236109818 236110188 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21404068
chr1 236109818 236110188 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107886473
Genes associated with rs542611841[chr1:236109831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More