EnhancerDB
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  3. rs542612172[chr16:27416979]
Enhancers that have rs542612172[chr16:27416979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27411465 27422375 enh31753
Liver (HepG2) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Muscle (Myoblast) Thymus
chr16 27416770 27417173 vista22278
VISTA
Transcript factors that have rs542612172[chr16:27416979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27411627 27418100 ZNF274 GTRD no Blood (GM12878) 108190676
chr16 27411627 27418100 ZNF274 GTRD no Blood (GM12878) 108190677
chr16 27411627 27418100 ZNF274 GTRD no Blood (GM12878) 108190678
chr16 27416637 27419003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190714
chr16 27416637 27419003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190715
chr16 27416676 27417076 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190716
chr16 27416699 27417904 ZNF274 GTRD no Blood (GM12878) 108190717
chr16 27416699 27417904 ZNF274 GTRD no Blood (GM12878) 108190718
chr16 27416705 27417115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190719
chr16 27416852 27417288 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190720
chr16 27416869 27417279 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190721
chr16 27416869 27417385 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190722
chr16 27416887 27417400 EBF1 UCSC Txn Factor no Conserved 108190723
chr16 27416887 27417400 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190724
chr16 27416908 27417363 NFIC UCSC Txn Factor no Conserved 108190725
chr16 27416908 27417363 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190726
chr16 27416910 27417240 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190727
chr16 27416912 27417323 RELA UCSC Txn Factor no Conserved 108190728
chr16 27416916 27417246 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190729
chr16 27416921 27417245 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190730
chr16 27416924 27417307 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190731
chr16 27416958 27417275 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190732
chr16 27416962 27417291 RUNX3 UCSC Txn Factor no Conserved 108190733
chr16 27416962 27417291 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190734
chr16 27416965 27417150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190735
chr16 27416973 27416983 MAX JASPAR yes 10192748
chr16 27416973 27416983 MAX JASPAR yes 49361318
chr16 27416973 27417310 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190736
chr16 27416974 27416984 BHLHE40 JASPAR yes 10192749
chr16 27416974 27416984 HEY1 JASPAR yes 10192750
chr16 27416974 27416984 MLXIPL JASPAR yes 10192751
chr16 27416974 27416984 MLX JASPAR yes 10192752
chr16 27416974 27416984 BHLHE40 JASPAR yes 49361319
chr16 27416974 27416984 HEY1 JASPAR yes 49361320
chr16 27416974 27416984 MLXIPL JASPAR yes 49361321
chr16 27416974 27416984 MLX JASPAR yes 49361322
chr16 27416974 27417354 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190737
chr16 27416976 27416981 MYC TRANSFAC yes 10192753
chr16 27416976 27416981 USF1 TRANSFAC yes 10192754
chr16 27416976 27416981 USF2 TRANSFAC yes 10192755
chr16 27416976 27416981 MYC TRANSFAC yes 49361323
chr16 27416976 27416981 USF1 TRANSFAC yes 49361324
chr16 27416976 27416981 USF2 TRANSFAC yes 49361325
chr16 27416978 27416999 ZNF263 JASPAR yes 10192756
chr16 27416978 27416999 ZNF263 JASPAR yes 49361326
chr16 27416978 27417258 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190738
Genes associated with rs542612172[chr16:27416979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More