EnhancerDB
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  3. rs542681839[chr1:211800554]
Enhancers that have rs542681839[chr1:211800554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211798651 211830775 enh12635
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Heart
Transcript factors that have rs542681839[chr1:211800554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211800170 211801914 ZNF274 GTRD no Bone Marrow (K562) 21376674
chr1 211800479 211801826 ZNF274 GTRD no Bone Marrow (K562) 21376675
chr1 211800549 211800559 EMX1 JASPAR yes 35072515
chr1 211800549 211800559 EMX2 JASPAR yes 35072516
chr1 211800549 211800559 GBX2 JASPAR yes 35072517
chr1 211800549 211800559 HOXB2 JASPAR yes 35072518
chr1 211800549 211800559 HOXB3 JASPAR yes 35072519
chr1 211800549 211800559 LHX6 JASPAR yes 35072520
chr1 211800549 211800559 MEOX1 JASPAR yes 35072521
chr1 211800549 211800559 MEOX2 JASPAR yes 35072522
chr1 211800549 211800559 MNX1 JASPAR yes 35072523
chr1 211800549 211800559 POU6F1 JASPAR yes 35072524
chr1 211800550 211800558 LMX1A JASPAR yes 35072525
chr1 211800550 211800558 LMX1B JASPAR yes 35072526
chr1 211800550 211800558 NKX6-1 JASPAR yes 35072527
chr1 211800550 211800558 NKX6-2 JASPAR yes 35072528
chr1 211800550 211800558 PDX1 JASPAR yes 35072529
chr1 211800550 211800558 VAX1 JASPAR yes 35072530
chr1 211800550 211800558 VAX2 JASPAR yes 35072531
chr1 211800550 211800558 VSX1 JASPAR yes 35072532
chr1 211800552 211800560 HOXA5 JASPAR yes 35072533
Genes associated with rs542681839[chr1:211800554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More