EnhancerDB
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  3. rs542870940[chr3:120027409]
Enhancers that have rs542870940[chr3:120027409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 120019325 120028220 enh86489
Colon (HCT116) Adrenal
Transcript factors that have rs542870940[chr3:120027409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 120027389 120027410 IRF1 JASPAR yes 5204380
chr3 120027390 120027411 IRF1 JASPAR yes 5204382
chr3 120027394 120027415 IRF1 JASPAR yes 5204383
chr3 120027395 120027410 FOXP1 JASPAR yes 5204384
chr3 120027395 120027416 IRF1 JASPAR yes 5204385
chr3 120027396 120027417 IRF1 JASPAR yes 5204386
chr3 120027397 120027412 FOXP1 JASPAR yes 5204387
chr3 120027397 120027418 IRF1 JASPAR yes 5204388
chr3 120027398 120027419 IRF1 JASPAR yes 5204389
chr3 120027399 120027414 FOXP1 JASPAR yes 5204390
chr3 120027399 120027420 IRF1 JASPAR yes 5204391
chr3 120027400 120027415 FOXP1 JASPAR yes 5204392
chr3 120027400 120027421 IRF1 JASPAR yes 5204393
chr3 120027401 120027416 FOXP1 JASPAR yes 5204394
chr3 120027402 120027417 FOXP1 JASPAR yes 5204395
chr3 120027403 120027418 FOXP1 JASPAR yes 5204396
chr3 120027404 120027419 FOXP1 JASPAR yes 5204397
chr3 120027405 120027420 FOXP1 JASPAR yes 5204398
chr3 120027406 120027421 FOXP1 JASPAR yes 5204399
chr3 120027407 120027422 FOXP1 JASPAR yes 5204400
chr3 120027408 120027423 FOXP1 JASPAR yes 5204401
Genes associated with rs542870940[chr3:120027409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More