-
Home
- SNP
- rs542874157[chr16:85759549]
Enhancers that have rs542874157[chr16:85759549]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
85746708 |
85760055 |
enh16876 |
|
|
Transcript factors that have rs542874157[chr16:85759549]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
85758567
|
85759829
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108217070
|
|
|
chr16
|
85758600
|
85760337
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108217071
|
|
|
chr16
|
85758638
|
85760386
|
STAT3
|
GTRD
|
no
|
Blood (OCI-LY7)
|
108217072
|
|
|
chr16
|
85758651
|
85760286
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108217073
|
|
|
chr16
|
85758668
|
85760224
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21730904
|
|
|
chr16
|
85758668
|
85760224
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108217074
|
|
|
chr16
|
85758713
|
85760264
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108217075
|
|
|
chr16
|
85758730
|
85760738
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21730905
|
|
|
chr16
|
85758730
|
85760738
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108217076
|
|
|
chr16
|
85758731
|
85760221
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108217077
|
|
|
chr16
|
85758736
|
85760646
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21730906
|
|
|
chr16
|
85758736
|
85760646
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108217078
|
|
|
chr16
|
85758741
|
85760343
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108217079
|
|
|
chr16
|
85758741
|
85760413
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108217080
|
|
|
chr16
|
85759535
|
85759554
|
CTCF
|
JASPAR
|
yes
|
|
12092759
|
|
|
chr16
|
85759539
|
85759549
|
FIGLA
|
JASPAR
|
yes
|
|
12092761
|
|
|
chr16
|
85759541
|
85759555
|
PLAG1
|
JASPAR
|
yes
|
|
12092763
|
|
|
chr16
|
85759546
|
85759561
|
TFAP2A
|
JASPAR
|
yes
|
|
12092764
|
|
|
chr16
|
85759546
|
85759561
|
TFAP2C
|
JASPAR
|
yes
|
|
12092765
|
|
|
chr16
|
85759548
|
85759563
|
TFAP2A
|
JASPAR
|
yes
|
|
12092766
|
|
|
chr16
|
85759549
|
85759560
|
EBF1
|
JASPAR
|
yes
|
|
12092767
|
|
Genes associated with rs542874157[chr16:85759549], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |