EnhancerDB
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  3. rs542969575[chr6:42731750]
Enhancers that have rs542969575[chr6:42731750]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42728265 42744755 enh9126
Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus
Transcript factors that have rs542969575[chr6:42731750]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42731739 42731753 PLAG1 JASPAR yes 101739236
chr6 42731746 42731751 SP1 TRANSFAC yes 101739237
chr6 42731747 42731752 SP1 TRANSFAC yes 101739238
chr6 42731747 42731756 THAP1 JASPAR yes 101739239
chr6 42731750 42731754 LFA1 TRANSFAC yes 101739240
Genes associated with rs542969575[chr6:42731750], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More