-
Home
- SNP
- rs543327887[chr11:1040025]
Enhancers that have rs543327887[chr11:1040025]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr11 |
1039894 |
1040259 |
vista9324 |
|
|
Transcript factors that have rs543327887[chr11:1040025]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr11
|
1038610
|
1043164
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107950680
|
|
|
chr11
|
1039234
|
1040408
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107950681
|
|
|
chr11
|
1039258
|
1041157
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107950682
|
|
|
chr11
|
1039259
|
1040719
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107950683
|
|
|
chr11
|
1039631
|
1040323
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107950685
|
|
|
chr11
|
1039654
|
1042622
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107950686
|
|
|
chr11
|
1039686
|
1041194
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107950687
|
|
|
chr11
|
1039722
|
1040155
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107950688
|
|
|
chr11
|
1039875
|
1040628
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107950689
|
|
|
chr11
|
1039984
|
1042775
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107950690
|
|
|
chr11
|
1040006
|
1040027
|
REST
|
JASPAR
|
yes
|
|
114026731
|
|
|
chr11
|
1040007
|
1040026
|
REST
|
JASPAR
|
yes
|
|
114026732
|
|
|
chr11
|
1040007
|
1040823
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107950691
|
|
|
chr11
|
1040008
|
1040301
|
TCF7L2
|
UCSC Txn Factor
|
no
|
Conserved
|
107950692
|
|
|
chr11
|
1040008
|
1040301
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107950693
|
|
|
chr11
|
1040023
|
1040044
|
ZNF263
|
JASPAR
|
yes
|
|
114026735
|
|
Genes associated with rs543327887[chr11:1040025], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |