EnhancerDB
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  3. rs543580080[chr1:55778591]
Enhancers that have rs543580080[chr1:55778591]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55772775 55779376 enh26719
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube)
Transcript factors that have rs543580080[chr1:55778591]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55778578 55778598 TBX19 JASPAR yes 29027486
chr1 55778580 55778596 T JASPAR yes 29027487
chr1 55778585 55778599 E2F7 JASPAR yes 29027488
chr1 55778586 55778598 E2F8 JASPAR yes 29027489
Genes associated with rs543580080[chr1:55778591], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More