-
Home
- SNP
- rs543862190[chr19:888582]
Enhancers that have rs543862190[chr19:888582]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
884238 |
889523 |
enh115681 |
|
|
| chr19 |
888565 |
888780 |
vista28115 |
|
|
Transcript factors that have rs543862190[chr19:888582]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
888366
|
889656
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347301
|
|
|
chr19
|
888439
|
889310
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347302
|
|
|
chr19
|
888471
|
890076
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347303
|
|
|
chr19
|
888477
|
889576
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347304
|
|
|
chr19
|
888477
|
889883
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108347305
|
|
|
chr19
|
888510
|
889895
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347306
|
|
|
chr19
|
888521
|
889270
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347307
|
|
|
chr19
|
888537
|
889346
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108347308
|
|
|
chr19
|
888539
|
889311
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108347309
|
|
|
chr19
|
888540
|
888860
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347310
|
|
|
chr19
|
888542
|
889145
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108347311
|
|
|
chr19
|
888555
|
888838
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347312
|
|
|
chr19
|
888579
|
888591
|
YY1
|
JASPAR
|
yes
|
|
70777509
|
|
|
chr19
|
888579
|
888591
|
YY1
|
JASPAR
|
yes
|
|
111981577
|
|
Genes associated with rs543862190[chr19:888582], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |