-
Home
- SNP
- rs544972521[chr19:5250615]
Enhancers that have rs544972521[chr19:5250615]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
5248205 |
5255695 |
enh32877 |
|
|
Transcript factors that have rs544972521[chr19:5250615]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
5250025
|
5250812
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374815
|
|
|
chr19
|
5250029
|
5250651
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374816
|
|
|
chr19
|
5250133
|
5250933
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374819
|
|
|
chr19
|
5250167
|
5250936
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374820
|
|
|
chr19
|
5250184
|
5250736
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374821
|
|
|
chr19
|
5250382
|
5250858
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374822
|
|
|
chr19
|
5250522
|
5250850
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374823
|
|
|
chr19
|
5250609
|
5250623
|
GLIS2
|
JASPAR
|
yes
|
|
112223329
|
|
|
chr19
|
5250609
|
5250623
|
GLIS3
|
JASPAR
|
yes
|
|
112223330
|
|
|
chr19
|
5250612
|
5250621
|
TFAP2A
|
JASPAR
|
yes
|
|
112223331
|
|
|
chr19
|
5250615
|
5250626
|
NFKB1
|
JASPAR
|
yes
|
|
112223332
|
|
Genes associated with rs544972521[chr19:5250615], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |