EnhancerDB
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  3. rs545529334[chr17:6399261]
Enhancers that have rs545529334[chr17:6399261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 6394222 6402711 enh4227
Prostate (RWPE1) Blood (OCI-LY7) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube)
Transcript factors that have rs545529334[chr17:6399261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 6399090 6399450 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108233270
chr17 6399123 6399413 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108233271
chr17 6399139 6399409 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108233272
chr17 6399167 6399417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108233273
chr17 6399178 6399394 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108233274
chr17 6399186 6399376 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108233275
chr17 6399253 6399268 TFAP2A JASPAR yes 52915218
chr17 6399253 6399268 TFAP2C JASPAR yes 52915219
chr17 6399256 6399267 TFAP2A JASPAR yes 52915220
chr17 6399256 6399267 TFAP2B JASPAR yes 52915221
chr17 6399256 6399267 TFAP2C JASPAR yes 52915222
chr17 6399257 6399266 TFAP2A JASPAR yes 52915223
Genes associated with rs545529334[chr17:6399261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More