-
Home
- SNP
- rs545540949[chr1:152008142]
Enhancers that have rs545540949[chr1:152008142]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
152004845 |
152009275 |
enh625 |
|
|
Transcript factors that have rs545540949[chr1:152008142]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
152006577
|
152009893
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107830751
|
|
|
chr1
|
152006577
|
152009893
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107830752
|
|
|
chr1
|
152007460
|
152008158
|
GATA3
|
UCSC Txn Factor
|
no
|
Conserved
|
107830845
|
|
|
chr1
|
152007460
|
152008158
|
GATA3
|
UCSC Txn Factor
|
no
|
Conserved
|
107830846
|
|
|
chr1
|
152007544
|
152008168
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107830852
|
|
|
chr1
|
152007784
|
152008160
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107830878
|
|
|
chr1
|
152007883
|
152008319
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107830879
|
|
|
chr1
|
152007990
|
152008374
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
107830880
|
|
|
chr1
|
152007993
|
152008497
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107830881
|
|
|
chr1
|
152008137
|
152008151
|
STAT1
|
JASPAR
|
yes
|
|
32214565
|
|
|
chr1
|
152008138
|
152008148
|
ELK1
|
JASPAR
|
yes
|
|
32214566
|
|
|
chr1
|
152008139
|
152008150
|
ETV2
|
JASPAR
|
yes
|
|
32214567
|
|
|
chr1
|
152008140
|
152008150
|
ERG
|
JASPAR
|
yes
|
|
32214568
|
|
|
chr1
|
152008140
|
152008150
|
FLI1
|
JASPAR
|
yes
|
|
32214569
|
|
|
chr1
|
152008142
|
152008148
|
ETS1
|
JASPAR
|
yes
|
|
32214570
|
|
Genes associated with rs545540949[chr1:152008142], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |