EnhancerDB
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  3. rs546132399[chr17:62137208]
Enhancers that have rs546132399[chr17:62137208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62132205 62140819 enh62639
Esophagus Prostate (PC-3) Lung (PC-9)
Transcript factors that have rs546132399[chr17:62137208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62135185 62138817 ZNF143 GTRD no Epithelial (MCF-7) 108282053
chr17 62135396 62138804 ZNF143 GTRD no Epithelial (MCF-7) 108282054
chr17 62136245 62140183 ZNF143 GTRD no Epithelial (MCF-7) 108282055
chr17 62136265 62140706 ZNF143 GTRD no Epithelial (MCF-7) 108282056
chr17 62136265 62140706 ZNF143 GTRD no Epithelial (MCF-7) 108282057
chr17 62136311 62140209 ZNF143 GTRD no Epithelial (MCF-7) 108282058
chr17 62136854 62140730 TCF7L2 GTRD no Colon (HCT116) 108282059
chr17 62136854 62140730 TCF7L2 GTRD no Colon (HCT116) 108282060
chr17 62136991 62140449 TCF7L2 GTRD no Colon (HCT116) 108282061
chr17 62136991 62140449 TCF7L2 GTRD no Colon (HCT116) 108282062
chr17 62137202 62137223 IRF1 JASPAR yes 55273245
chr17 62137203 62137224 IRF1 JASPAR yes 55273246
chr17 62137205 62137226 IRF1 JASPAR yes 55273247
chr17 62137206 62137227 IRF1 JASPAR yes 55273248
chr17 62137207 62137222 FOXP1 JASPAR yes 55273249
chr17 62137207 62137228 IRF1 JASPAR yes 55273250
chr17 62137208 62137223 FOXP1 JASPAR yes 55273251
chr17 62137208 62137229 IRF1 JASPAR yes 55273252
Genes associated with rs546132399[chr17:62137208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More