EnhancerDB
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  3. rs546183962[chr19:1945273]
Enhancers that have rs546183962[chr19:1945273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1941720 1950194 enh17846
Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (T-cell)
Transcript factors that have rs546183962[chr19:1945273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 21834083
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355816
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355817
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355818
chr19 1945263 1945278 TFAP2C JASPAR yes 112038422
chr19 1945265 1945277 INSM1 JASPAR yes 112038423
chr19 1945265 1945280 TFAP2A JASPAR yes 112038424
chr19 1945266 1945277 TFAP2A JASPAR yes 112038425
chr19 1945266 1945277 TFAP2B JASPAR yes 112038426
chr19 1945266 1945277 TFAP2C JASPAR yes 112038427
chr19 1945267 1945276 TFAP2A JASPAR yes 112038428
Genes associated with rs546183962[chr19:1945273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More