EnhancerDB
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  3. rs546262538[chr19:6580215]
Enhancers that have rs546262538[chr19:6580215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6566085 6582575 enh4988
Bone Marrow (K562) Cervix (HeLa-S3) Esophagus Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Blood (T-cell)
Transcript factors that have rs546262538[chr19:6580215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378571
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378572
chr19 6576640 6581025 ZNF274 GTRD no Blood (GM12878) 108378578
chr19 6576640 6581025 ZNF274 GTRD no Blood (GM12878) 108378579
chr19 6579381 6581351 ZNF274 GTRD no Blood (GM12878) 108378735
chr19 6579404 6581052 ZNF274 GTRD no Blood (GM12878) 108378737
chr19 6579409 6581234 ZNF274 GTRD no Blood (GM12878) 108378739
chr19 6579424 6580584 ZNF274 GTRD no Blood (GM12878) 108378740
chr19 6579429 6580640 ZNF274 GTRD no Blood (GM12878) 108378741
chr19 6579442 6580529 ZNF274 GTRD no Blood (GM12878) 108378742
chr19 6579539 6580975 ZNF274 GTRD no Cervix (HeLa-S3) 21845875
chr19 6579539 6580975 ZNF274 GTRD no Cervix (HeLa-S3) 108378744
chr19 6579717 6580860 ZNF274 GTRD no Cervix (HeLa-S3) 21845876
chr19 6579717 6580860 ZNF274 GTRD no Cervix (HeLa-S3) 108378748
chr19 6579782 6580346 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108378749
chr19 6579856 6581211 TCF7L2 GTRD no Colon (HCT116) 21845878
chr19 6579856 6581211 TCF7L2 GTRD no Colon (HCT116) 108378752
chr19 6579877 6581289 TCF7L2 GTRD no Colon (HCT116) 21845880
chr19 6579877 6581289 TCF7L2 GTRD no Colon (HCT116) 108378754
chr19 6579981 6580545 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108378758
chr19 6580030 6581163 TCF7L2 GTRD no Colon (HCT116) 21845881
chr19 6580040 6581021 ZNF274 GTRD no Cervix (HeLa-S3) 21845882
chr19 6580149 6580940 ZNF274 GTRD no Bone Marrow (K562) 21845883
chr19 6580181 6580809 ZNF274 GTRD no Bone Marrow (K562) 21845884
chr19 6580204 6580215 CEBPB JASPAR yes 112278133
chr19 6580213 6580741 ZNF274 GTRD no Bone Marrow (K562) 21845885
Genes associated with rs546262538[chr19:6580215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More