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- SNP
- rs546490127[chr17:39686702]
Enhancers that have rs546490127[chr17:39686702]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
39686458 |
39686891 |
vista24780 |
|
|
Transcript factors that have rs546490127[chr17:39686702]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
39686040
|
39686745
|
EP300
|
UCSC Txn Factor
|
no
|
Conserved
|
108258523
|
|
|
chr17
|
39686262
|
39686766
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108258524
|
|
|
chr17
|
39686289
|
39686813
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
108258526
|
|
|
chr17
|
39686339
|
39686995
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108258529
|
|
|
chr17
|
39686360
|
39686796
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258530
|
|
|
chr17
|
39686366
|
39686836
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
108258531
|
|
|
chr17
|
39686389
|
39686719
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258532
|
|
|
chr17
|
39686390
|
39687113
|
GATA2
|
UCSC Txn Factor
|
no
|
Conserved
|
108258533
|
|
|
chr17
|
39686392
|
39686768
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258534
|
|
|
chr17
|
39686395
|
39687174
|
GATA1
|
UCSC Txn Factor
|
no
|
Conserved
|
108258535
|
|
|
chr17
|
39686401
|
39686711
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
108258536
|
|
|
chr17
|
39686402
|
39686872
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108258537
|
|
|
chr17
|
39686402
|
39687087
|
GATA3
|
UCSC Txn Factor
|
no
|
Conserved
|
108258538
|
|
|
chr17
|
39686405
|
39686775
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258539
|
|
|
chr17
|
39686405
|
39686789
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258540
|
|
|
chr17
|
39686409
|
39686729
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258541
|
|
|
chr17
|
39686410
|
39686946
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258542
|
|
|
chr17
|
39686411
|
39686787
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258543
|
|
|
chr17
|
39686414
|
39686810
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258544
|
|
|
chr17
|
39686422
|
39686758
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258545
|
|
|
chr17
|
39686423
|
39686763
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258546
|
|
|
chr17
|
39686423
|
39686775
|
JUN
|
UCSC Txn Factor
|
no
|
Conserved
|
108258547
|
|
|
chr17
|
39686424
|
39686880
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258548
|
|
|
chr17
|
39686426
|
39686726
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258549
|
|
|
chr17
|
39686428
|
39686742
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258551
|
|
|
chr17
|
39686428
|
39686750
|
JUND
|
UCSC Txn Factor
|
no
|
Conserved
|
108258552
|
|
|
chr17
|
39686430
|
39686750
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258553
|
|
|
chr17
|
39686431
|
39686741
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258554
|
|
|
chr17
|
39686432
|
39686712
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258555
|
|
|
chr17
|
39686436
|
39686715
|
FOS
|
UCSC Txn Factor
|
no
|
Conserved
|
108258556
|
|
|
chr17
|
39686438
|
39686802
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258557
|
|
|
chr17
|
39686439
|
39686829
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258558
|
|
|
chr17
|
39686441
|
39686731
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258559
|
|
|
chr17
|
39686443
|
39686787
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258560
|
|
|
chr17
|
39686445
|
39686716
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
108258562
|
|
|
chr17
|
39686445
|
39686789
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258563
|
|
|
chr17
|
39686449
|
39686703
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108258564
|
|
|
chr17
|
39686449
|
39686713
|
FOSL2
|
UCSC Txn Factor
|
no
|
Conserved
|
108258565
|
|
|
chr17
|
39686452
|
39686928
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258566
|
|
|
chr17
|
39686453
|
39686713
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108258567
|
|
|
chr17
|
39686453
|
39686777
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258568
|
|
|
chr17
|
39686454
|
39686814
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258569
|
|
|
chr17
|
39686455
|
39686791
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258570
|
|
|
chr17
|
39686456
|
39686736
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258571
|
|
|
chr17
|
39686458
|
39686728
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
108258572
|
|
|
chr17
|
39686459
|
39686715
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258573
|
|
|
chr17
|
39686460
|
39686709
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258574
|
|
|
chr17
|
39686462
|
39686826
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258575
|
|
|
chr17
|
39686465
|
39686741
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108258576
|
|
|
chr17
|
39686471
|
39686715
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258577
|
|
|
chr17
|
39686472
|
39686707
|
JUNB
|
UCSC Txn Factor
|
no
|
Conserved
|
108258578
|
|
|
chr17
|
39686472
|
39686707
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258579
|
|
|
chr17
|
39686475
|
39686731
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
108258580
|
|
|
chr17
|
39686480
|
39686740
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258581
|
|
|
chr17
|
39686483
|
39686747
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258582
|
|
|
chr17
|
39686485
|
39686809
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258583
|
|
|
chr17
|
39686486
|
39686716
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258584
|
|
|
chr17
|
39686489
|
39686765
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258585
|
|
|
chr17
|
39686494
|
39687070
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258588
|
|
|
chr17
|
39686496
|
39686726
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108258589
|
|
|
chr17
|
39686506
|
39686706
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258591
|
|
|
chr17
|
39686516
|
39686708
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258594
|
|
|
chr17
|
39686518
|
39688864
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108258596
|
|
|
chr17
|
39686521
|
39686737
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258597
|
|
|
chr17
|
39686522
|
39686717
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258598
|
|
|
chr17
|
39686533
|
39686997
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
108258599
|
|
|
chr17
|
39686543
|
39689285
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
21757600
|
|
|
chr17
|
39686543
|
39689285
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108258601
|
|
|
chr17
|
39686563
|
39687113
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108258602
|
|
|
chr17
|
39686563
|
39689559
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108258603
|
|
|
chr17
|
39686574
|
39689553
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108258604
|
|
|
chr17
|
39686578
|
39689555
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108258605
|
|
|
chr17
|
39686581
|
39688740
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108258606
|
|
|
chr17
|
39686610
|
39689467
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
21757601
|
|
|
chr17
|
39686610
|
39689467
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108258608
|
|
|
chr17
|
39686615
|
39689656
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108258609
|
|
|
chr17
|
39686635
|
39687650
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108258610
|
|
|
chr17
|
39686636
|
39689561
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
21757602
|
|
|
chr17
|
39686636
|
39689561
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108258611
|
|
|
chr17
|
39686647
|
39687243
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
108258612
|
|
|
chr17
|
39686650
|
39688932
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21757603
|
|
|
chr17
|
39686650
|
39688932
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108258613
|
|
|
chr17
|
39686670
|
39689533
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
21757604
|
|
|
chr17
|
39686670
|
39689533
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108258614
|
|
|
chr17
|
39686683
|
39687821
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108258615
|
|
|
chr17
|
39686694
|
39689341
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108258616
|
|
Genes associated with rs546490127[chr17:39686702], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |