EnhancerDB
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  3. rs546490734[chr1:28843640]
Enhancers that have rs546490734[chr1:28843640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28831005 28856175 enh187
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs546490734[chr1:28843640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28843627 28843642 MEF2C JASPAR yes 27774821
chr1 28843630 28843645 FOXP1 JASPAR yes 27774822
chr1 28843631 28843646 FOXP1 JASPAR yes 27774823
chr1 28843631 28843652 IRF1 JASPAR yes 27774824
chr1 28843632 28843647 FOXP1 JASPAR yes 27774825
chr1 28843635 28843650 PRDM1 JASPAR yes 27774826
chr1 28843635 28843650 STAT2 JASPAR yes 27774827
chr1 28843635 28843653 NR3C1 JASPAR yes 27774828
Genes associated with rs546490734[chr1:28843640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More