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- rs546551969[chr12:50100150]
Enhancers that have rs546551969[chr12:50100150]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
50100082 |
50100376 |
vista13359 |
|
|
Transcript factors that have rs546551969[chr12:50100150]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
50098573
|
50100544
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108030811
|
|
|
chr12
|
50098573
|
50100544
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030812
|
|
|
chr12
|
50099375
|
50100261
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108030813
|
|
|
chr12
|
50099534
|
50100474
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030814
|
|
|
chr12
|
50099602
|
50100213
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030815
|
|
|
chr12
|
50099665
|
50100293
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108030816
|
|
|
chr12
|
50099957
|
50100473
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030819
|
|
|
chr12
|
50100137
|
50100158
|
ZNF263
|
JASPAR
|
yes
|
|
82401170
|
|
|
chr12
|
50100143
|
50100163
|
RREB1
|
JASPAR
|
yes
|
|
82401171
|
|
|
chr12
|
50100143
|
50100579
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030820
|
|
|
chr12
|
50100145
|
50100150
|
SP1
|
TRANSFAC
|
yes
|
|
82401172
|
|
|
chr12
|
50100146
|
50100151
|
SP1
|
TRANSFAC
|
yes
|
|
82401173
|
|
|
chr12
|
50100150
|
50100170
|
RREB1
|
JASPAR
|
yes
|
|
82401174
|
|
Genes associated with rs546551969[chr12:50100150], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |