EnhancerDB
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  3. rs546610859[chr19:2463097]
Enhancers that have rs546610859[chr19:2463097]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2462417 2466543 enh86294
Colon (HCT116)
Transcript factors that have rs546610859[chr19:2463097]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2461022 2463670 TCF7L2 GTRD no Colon (HCT116) 21835452
chr19 2461416 2463581 TCF7L2 GTRD no Colon (HCT116) 21835455
chr19 2461451 2463614 TCF7L2 GTRD no Colon (HCT116) 21835456
chr19 2461460 2463707 TCF7L2 GTRD no Colon (HCT116) 21835457
chr19 2461480 2463534 TCF7L2 GTRD no Colon (HCT116) 21835458
chr19 2461558 2463573 TCF7L2 GTRD no Colon (HCT116) 21835459
chr19 2461674 2463563 TCF7L2 GTRD no Colon (HCT116) 21835460
chr19 2462357 2465166 TCF7L2 GTRD no Colon (HCT116) 21835465
chr19 2462412 2465064 TCF7L2 GTRD no Colon (HCT116) 21835466
chr19 2462604 2463466 TCF7L2 GTRD no Colon (HCT116) 21835467
chr19 2462835 2463471 TCF7L2 GTRD no Colon (HCT116) 21835468
chr19 2462918 2463458 TCF7L2 GTRD no Colon (HCT116) 21835469
chr19 2462975 2463290 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21835470
chr19 2463023 2463399 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21835471
chr19 2463084 2463354 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21835472
chr19 2463095 2463108 SMAD2 JASPAR yes 112064176
Genes associated with rs546610859[chr19:2463097], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More