EnhancerDB
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  3. rs546638229[chr16:23890803]
Enhancers that have rs546638229[chr16:23890803]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 23884025 23895555 enh60595
Brain (SK-N-MC) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (T-cell)
Transcript factors that have rs546638229[chr16:23890803]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 23890797 23890818 IRF1 JASPAR yes 10025438
chr16 23890798 23890803 GATA2 JASPAR yes 10025439
chr16 23890798 23890819 IRF1 JASPAR yes 10025440
chr16 23890799 23890820 IRF1 JASPAR yes 10025441
chr16 23890800 23890821 IRF1 JASPAR yes 10025442
chr16 23890801 23890816 FOXP1 JASPAR yes 10025443
chr16 23890801 23890822 IRF1 JASPAR yes 10025444
chr16 23890802 23890817 FOXP1 JASPAR yes 10025445
chr16 23890802 23890823 IRF1 JASPAR yes 10025446
chr16 23890803 23890818 FOXP1 JASPAR yes 10025447
chr16 23890803 23890824 IRF1 JASPAR yes 10025448
Genes associated with rs546638229[chr16:23890803], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More