EnhancerDB
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  3. rs548024860[chr16:12642279]
Enhancers that have rs548024860[chr16:12642279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 12630505 12654813 enh3901
Liver (HepG2) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus
chr16 12642265 12642503 vista21928
VISTA
Transcript factors that have rs548024860[chr16:12642279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 12641818 12642287 ZNF274 GTRD no Bone Marrow (K562) 108183105
chr16 12641966 12642392 ZNF274 GTRD no Bone Marrow (K562) 108183106
chr16 12642044 12642490 ZNF274 GTRD no Bone Marrow (K562) 108183107
chr16 12642147 12642477 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691411
chr16 12642147 12642477 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183108
chr16 12642192 12642428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691412
chr16 12642192 12642428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183109
chr16 12642250 12642367 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691413
chr16 12642250 12642367 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183110
chr16 12642269 12642285 GLIS1 JASPAR yes 9589931
chr16 12642269 12642285 GLIS1 JASPAR yes 49344805
chr16 12642270 12642284 ZIC1 JASPAR yes 9589932
chr16 12642270 12642284 ZIC1 JASPAR yes 49344806
chr16 12642270 12642285 ZIC3 JASPAR yes 9589933
chr16 12642270 12642285 ZIC4 JASPAR yes 9589934
chr16 12642270 12642285 ZIC3 JASPAR yes 49344807
chr16 12642270 12642285 ZIC4 JASPAR yes 49344808
chr16 12642273 12642279 MZF1 JASPAR yes 9589935
chr16 12642273 12642279 MZF1 JASPAR yes 49344809
chr16 12642274 12642288 PLAG1 JASPAR yes 9589936
chr16 12642274 12642288 PLAG1 JASPAR yes 49344810
Genes associated with rs548024860[chr16:12642279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More