EnhancerDB
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  3. rs548089150[chr10:24680552]
Enhancers that have rs548089150[chr10:24680552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 24665565 24684360 enh13059
Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548089150[chr10:24680552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 24680544 24680557 ZBTB18 JASPAR yes 126069310
chr10 24680545 24680557 PKNOX1 JASPAR yes 126069311
chr10 24680545 24680557 TGIF1 JASPAR yes 126069312
chr10 24680546 24680555 SNAI2 JASPAR yes 126069313
chr10 24680546 24680556 FIGLA JASPAR yes 126069314
chr10 24680546 24680556 ID4 JASPAR yes 126069315
chr10 24680546 24680556 TCF3 JASPAR yes 126069316
chr10 24680546 24680556 TCF4 JASPAR yes 126069317
chr10 24680548 24680557 ZEB1 JASPAR yes 126069318
chr10 24680548 24680558 TBX21 JASPAR yes 126069319
chr10 24680549 24680557 MGA JASPAR yes 126069320
chr10 24680549 24680557 TBX15 JASPAR yes 126069321
chr10 24680549 24680557 TBX1 JASPAR yes 126069322
chr10 24680549 24680557 TBX4 JASPAR yes 126069323
chr10 24680549 24680557 TBX5 JASPAR yes 126069324
chr10 24680549 24680559 TBR1 JASPAR yes 126069325
chr10 24680549 24680562 SMAD2 JASPAR yes 126069326
Genes associated with rs548089150[chr10:24680552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More