EnhancerDB
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  3. rs548212794[chr1:23205598]
Enhancers that have rs548212794[chr1:23205598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23194765 23208835 enh11604
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Muscle (Myotube)
Transcript factors that have rs548212794[chr1:23205598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23205584 23205599 TFAP2C JASPAR yes 27401753
chr1 23205586 23205601 TFAP2A JASPAR yes 27401755
chr1 23205595 23205608 TFAP2A JASPAR yes 27401756
chr1 23205595 23205608 TFAP2B JASPAR yes 27401757
chr1 23205595 23205608 TFAP2C JASPAR yes 27401758
chr1 23205595 23205610 TFAP2C JASPAR yes 27401759
chr1 23205596 23205607 EBF1 JASPAR yes 27401760
chr1 23205596 23205608 TFAP2A JASPAR yes 27401761
chr1 23205596 23205608 TFAP2B JASPAR yes 27401762
chr1 23205596 23205608 TFAP2C JASPAR yes 27401763
Genes associated with rs548212794[chr1:23205598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More